Pseudomonas sp. NC02: C0058_02565
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Entry
C0058_02565 CDS
T10251
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C0058_02565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psnc03019
]
C0058_02565
03009 Ribosome biogenesis [BR:
psnc03009
]
C0058_02565
Messenger RNA biogenesis [BR:
psnc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C0058_02565
Ribosome biogenesis [BR:
psnc03009
]
Eukaryotic type
Pre-60S particles
RNases
C0058_02565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AUO20929
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Position
565417..565959
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLATMDEW
NTRTHGNSGLTQRVRDSRVSMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPEVKDSFHKGSTHLALDDIRESIAELQHYRKHFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatttggatcgatctggaaatgaccggtctgaaccctgac
accgacgtcatcatcgagatggcgaccattgtcaccgacagcaacctcaacaccttggcc
gaaggtccggtgatcgccattcaccacagcgacgcggtgctggccaccatggacgagtgg
aacacccgcacccacggcaactcgggcctgacccagcgtgtgcgcgacagccgcgtgagc
atggccgaggctgaagccgaaaccatcgccttcctggaaaagtgggtacccaagggcaag
tcgccgatctgcggcaacagcatttgccaggaccgccgctttctctatacccacatgaag
gcgctggaaagctacttccactaccgcaacctggacgtgtcgaccttgaaggagctggcc
gcgcgctgggcgccggaagtcaaagacagcttccacaagggcagcacccacctggcgctg
gacgatattcgcgagtcgattgccgagctgcagcattaccgcaagcatttcatcaagttc
taa
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