Pseudomonas sp. NC02: C0058_03480
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Entry
C0058_03480 CDS
T10251
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc03440
Homologous recombination
Brite
Enzymes [BR:
psnc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C0058_03480 (recB)
DNA repair and recombination proteins [BR:
psnc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C0058_03480 (recB)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AUO21095
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Position
767487..771164
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AA seq
1225 aa
AA seq
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MSGTKPLALAFPLKGSQLIEASAGTGKTFTISALYLRLVLGHGGDESGFGRELLPPQILV
VTFTDAATKELRERIRIRLAEAARFFREEIEEPDALIAELRDQYSPEQWPGCANRLDIAA
QWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRLFCYPMHDD
ALNWVRNNWGGPAALMPRVRALFGSERPTDETRDPAELINECLQERRQALVALKAPWQQW
AEELRNICLQAVAAKTVDGRKMQARYFEPWFEKISAWAADESLEQLDIGTGFTRLTPDGM
AEAWKGEPPRHPGIDAMASLKASLDALPTPDAAVLQHAAGWVGKRFEEEKRRRAEMGFDD
MLIRLNAALQADGGERLASVIREQFPVALIDEFQDTDPVQYSIFDSIYRIEENHLDSGLF
LIGDPKQAIYAFRGADIYTYLRARQSTTGRHHTLGTNFRSSHAMVEAVNHVFQRAEKGRG
AFLFREPDGTNPVPFQSVLSQGRKEQLQVNGQTLPALNLWHLPTDQPISGVLYRQQLAAS
CASQIVALLNGGQQGTAGFLGKDASFKGVLPSDIAILVRDGKEAQAVRGELAARGVRSVY
LSDKDSVFAAQEAHDLLAWLKACAEPDVERPLRAALACVTLNLSLPELERLNQDELAWEQ
RVMQFRDYRTIWRTQGVLPMLRRLLHDFKLPQTLITRSDGERVLTNLLHLSELLQQAAAE
LDGEQALIRHLAEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYDLVFLPFICSA
KPVDGSRLPLHYHDANGKSQVSLRPTAELIAQADDERLAEDLRLFYVALTRAKHACWLGI
ADLKRGNNNSSVLHLSALGYLLGGGASLGESGGLARWLLDLQEGCPALHYAEMPEADAVV
FHPPRNQATLLAPLLPKRKAAENWWIASYSALRIGESMSAASLEAPESPQAQKLFDDERL
DPDAPREVPASGGDIHRFPRGPNPGTFLHGLLEWAGGEGFNVTPEAIEDAVARRCNRRGW
EGWIGTLGGWLGHLLQARLPLGNGQVALSELRQYQIEMEFWFASHKVDVLALDKLVCQHT
HNGVSRVAAEPVLLNGMFKGFIDLTFEHEGRYYVADYKSNWLGPDDSAYTQQAMELSILD
HRYDLQYVLYLLALHRQLKARLPDYDYDRHVGGALYLFLRGTHSASQGAYFTRPPRELIE
SLDLLFQGKPLPPKAEPAWEQGELL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtacaaaacccctggccctggccttcccgctcaagggcagccaactgatcgaa
gccagtgccggcacaggcaagacatttaccatctcagcgctctacctgcggctggtactc
ggccacggaggggacgaatcgggcttcggccgcgagttgctgccgccgcaaattctcgtc
gtgacctttactgatgccgccaccaaagagctgcgtgaacgcatccgaatccgcctggca
gaagccgcgcgttttttccgcgaagaaatcgaagaacccgacgcgttgatcgcggaactg
cgcgaccaatacagccccgaacaatggcccggctgtgccaatcgcctggacatcgccgcc
cagtggatggatgaagccgccgtctcgaccattcacagctggtgccagcgcatgctgcgc
gagcacgccttcgacagcgggagcctgttcacccagaccctggagaccgaccacagcgac
ctgctcggcgaagtgctgcgcgactactggaggctgttctgctacccgatgcacgacgat
gcgctgaactgggtgcgcaacaattggggcggcccggcggccctgatgccacgggtacgc
gcgctgttcggcagcgagcggcccacggatgaaacgcgtgaccccgccgagctgatcaac
gaatgcctgcaagagcgccgccaagcactcgtcgcgctcaaggcaccctggcaacaatgg
gcagaagaattgcgcaacatttgcctgcaggccgtcgccgccaaaaccgtcgatggtcgc
aagatgcaagcccgttacttcgaaccctggttcgaaaaaatcagcgcctgggcagctgac
gagtctctcgaacaactggacatcggcaccggtttcacccgcctgacccccgacggcatg
gccgaagcctggaaaggcgaaccaccacgccatccgggtatcgacgccatggccagtctc
aaggccagcctcgacgccctgccaacgcccgatgctgctgtgctgcaacacgccgccggc
tgggtgggaaaacgcttcgaagaagaaaagcgccggcgcgccgaaatgggcttcgacgac
atgctgatccgcctcaacgccgccctgcaagccgacggcggcgagcgtttggccagcgtg
atccgcgagcaattcccggtcgccctgatcgacgagttccaggacaccgacccggtgcaa
tacagcatcttcgacagcatctaccgcatcgaagaaaaccacctcgacagcggcctgttt
ctgatcggcgacccaaagcaggcgatctacgccttccgtggcgccgacatctacacctac
ctgcgcgcgcgccagtccaccaccggccgccatcacaccctgggcaccaacttccgttcg
agccacgccatggtcgaggcggtaaaccacgtattccagcgcgcagaaaaaggccgtgga
gcgttcctgttccgtgagcccgacgggacgaatccggtgccgttccagtcggtattgtcc
caaggccgtaaggaacaactgcaggtcaacggtcagacgttgcctgcgctgaatctctgg
catctacccaccgaccagccgatctccggcgtgctctaccgccaacagttggccgcgtcc
tgtgccagtcaaatcgtcgcgttactcaatggcggccagcagggaactgccggattcctc
ggcaaagacgctagcttcaaaggcgtgctgccgtcagacatcgccatcctcgtgcgcgac
ggcaaggaagcccaggccgtgcgcggtgaactggctgcccgtggcgtgcgcagcgtttac
ctctccgataaggattctgtgttcgccgcccaggaagcccacgacctgctggcctggctc
aaggcctgtgccgagccggacgtcgagcgcccactgcgcgccgccctggcttgcgtcacc
ttgaacctgtcgctgcccgaactggagcgtttgaaccaggacgaactggcgtgggaacaa
cgcgtaatgcagttccgcgattaccgtacgatctggcgcacccaaggcgtgctgccgatg
ctgcggcgcctgttgcacgacttcaaattgccgcaaaccctgatcacccgcagcgatggc
gagcgggtattgaccaacctgttgcacctctcggaattgctgcaacaggcggccgcagag
ctggacggtgaacaagcgctgattcgccatctggccgaacatctcgcgctttccggccag
gccggtgaagagcagatcctgcgcctggaaagtgatgaacaactggtcaaagtggtaacg
atccacaaatccaaggggctggaatacgacctggttttcctgccgttcatttgctcggca
aaaccggtggatggcagccgcctgccgttgcattaccacgacgcaaacggcaaatcccag
gtcagcctcaggcccaccgccgagttgatcgcccaagccgacgatgaacggctggccgaa
gacttgcgtctgttttacgtggcgctgacccgcgccaaacacgcctgctggctgggcatc
gccgacctcaagcgtggcaataacaacagctcggtgctgcacctgtcggccctgggctac
ttgctcggcggcggcgcttcacttggcgagtccggcggcctggcccgctggttgcttgac
ctgcaggaaggttgcccggcactgcattacgcagaaatgcccgaggccgatgcggtcgta
ttccacccgccgcgtaaccaagccaccttgctcgcgccgctgctgcccaagcgcaaggcg
gcagaaaactggtggatcgcttcctacagtgcgctgcgtatcggcgagagcatgagtgcg
gcgagcctcgaagcgccggaaagcccacaagcgcagaagctgttcgatgacgaacgcctc
gacccggatgccccacgcgaagtgccggcttccggtggcgatattcaccgtttcccacgc
gggccgaatcccggcaccttcctccatggcctgctggaatgggcgggcggcgaaggcttc
aatgttaccccggaggccatcgaagatgcggttgcccgccgctgcaaccgacgtggctgg
gaaggctggatcggcacactcggcggttggctcgggcatctgttgcaagcccggttgccg
ctgggcaacgggcaggtggcccttagcgagttgcggcagtaccagatcgaaatggagttc
tggtttgccagccacaaggtcgacgtcctcgcactcgacaaactggtgtgccagcacact
cacaatggcgtatcccgcgtggccgccgaaccggtgctgctcaatggcatgttcaagggt
tttatcgacctgacctttgaacacgaaggccgctactacgtggccgactacaaatccaat
tggcttggtcccgatgattcggcctacacgcagcaggccatggaactgtcgatcctcgac
catcgttacgacctgcaatacgtactttacctgctggccctgcatcgccagctgaaggcg
cggctgccggattacgactacgaccgtcacgtcggcggcgcgttgtacctgttcctgcgg
ggcacccattccgcgagccagggcgcgtatttcacccgaccaccccgggaattgatcgaa
agcctggacctgctgttccagggcaaaccgctgccacccaaggccgagcccgcctgggaa
caaggagagctgctatga
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