KEGG   Pseudomonas sp. NC02: C0058_05095
Entry
C0058_05095       CDS       T10251                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
psnc  Pseudomonas sp. NC02
Brite
KEGG Orthology (KO) [BR:psnc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psnc03032]
    C0058_05095
   03036 Chromosome and associated proteins [BR:psnc03036]
    C0058_05095
   03400 DNA repair and recombination proteins [BR:psnc03400]
    C0058_05095
DNA replication proteins [BR:psnc03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    C0058_05095
Chromosome and associated proteins [BR:psnc03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    C0058_05095
DNA repair and recombination proteins [BR:psnc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      C0058_05095
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 HTH_IclR SSPI
Other DBs
NCBI-ProteinID: AUO21386
LinkDB
Position
1118103..1118384
AA seq 93 aa
MAITKDQLIADLAEAVDAPKTTVRALLDQLSQIVADQLENGGEITLPGVGKLKVTERPAR
TGRNPSTGAAIEIAAKKVIKLVVAKGLTDAVNK
NT seq 282 nt   +upstreamnt  +downstreamnt
atggctattactaaagaccaactgatcgctgatctggctgaagctgtagacgcaccgaaa
accaccgtgcgtgctctgctggaccaactgagccagatcgttgctgatcagctggaaaac
ggcggcgaaatcactctgccaggcgttggcaaactgaaagtgaccgagcgtcctgcccgt
actggccgtaacccttcgactggcgctgccatcgaaatcgctgccaagaaagttatcaag
ctggttgtggccaaaggcctgaccgacgctgttaacaagtaa

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