Pseudomonas sp. NC02: C0058_05605
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Entry
C0058_05605 CDS
T10251
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
psnc Pseudomonas sp. NC02
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psnc03009
]
C0058_05605 (der)
Ribosome biogenesis [BR:
psnc03009
]
Prokaryotic type
GTPases
C0058_05605 (der)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
ABC_tran
DUF5906
NOG1
Ras
AAA_24
AAA_18
cobW
NTPase_1
SRP54
SRPRB
AAA_14
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
AUO21486
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All DBs
Position
1219880..1221349
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AA seq
489 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANKI
DNIDPEMARAEFSPMGLGDAIPIAGAHGRGITQMLEIALRDFPRDDVDEVEGEEEIVAEG
EEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFERN
DEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF
ALEAGRALVIAINKWDGMTPSERDYVKVELQRRLFFVEFADIHFISALHGTGVGNLYASV
QNSFKSAVTRWPTNRLTQILEDAVSEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQLE
KVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNSLTDRQVNKKRRMMTHHKK
ADKKRRDKR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccgaccgaacgtcggcaagtccaccttgttcaac
cgcctgaccaggactcgcgacgccatcgtcggcgacttgtccggtctgacccgtgatcgc
caatacggtgaggcaaagtggcaagggcgctcctacattattgtcgacaccggtggtatc
tccggtgacgagcatggcatggacgaaaagatggccgagcaatcgctgctggccattgaa
gaagctgatgtcgtgttgttcctggtggacgcccgcgcgggctacaccgctgcagaccag
atgattggcgagcacctgcgcaagcgcaacaagcgttcctacgtggtggccaacaagatc
gacaacatcgatcctgaaatggcccgcgccgagttcagcccgatgggcctgggcgacgcg
atcccgatcgccggtgcccacggtcgcggcatcacccagatgctggaaatcgccctgcgc
gacttcccgcgtgatgacgtggatgaagtcgaaggcgaagaagaaatcgttgccgaaggc
gaggaagccaagcgcattcctggcccaagcgaaaaagacggtatcaagatcgcgatcatc
ggccgtccgaacgtcggcaagtcgaccctggtcaaccgcatgctcggtgaagaccgggta
atcgtctatgacgagccgggcaccactcgcgacagcatctacatcccgttcgagcgtaac
gacgagaagtacacgctgatcgacactgccggtgtgcgcaagcgcggcaagatccacgaa
gaagttgaaaagttctccgtggtgaaaaccctgcaggcgatcaaagacgccaacgtggtg
atcttcgtcatggacgcccgcgaaggcgtggtagaccacgacctgaacttgctgggcttt
gccctggaagccggtcgcgccctggtgattgcgatcaacaagtgggacggcatgacgccg
agcgagcgcgactacgtcaaggtcgagctgcagcgtcgcctgttcttcgtcgagtttgcc
gatatccactttatatcggcactgcacggtaccggcgtgggtaacctctacgcctcggtg
cagaactcgttcaagtccgcggttacccgctggccgaccaaccgcctgacccagattctt
gaagatgcggtcagcgagcacgcgccgccgatggtcaacaaccgtcggatcaagctgcgc
tacgctcacttgggtggtgccaacccgccgattatcgtgattcacggtaaccagctggag
aaggtgccgaagtcctacgtgcgttacctggaaaatacctaccgccgcgtcttgaaactg
gtcggtacgccgatccgtatcgagttcaagggtggcgagaacccgtacgaaggtaacaag
aacagcctcaccgaccgccaggtaaacaaaaagcgccggatgatgacgcaccacaagaag
gccgacaaaaagcgccgcgacaagcgctga
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