Pseudomonas sp. NC02: C0058_06370
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Entry
C0058_06370 CDS
T10251
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psnc Pseudomonas sp. NC02
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psnc03016
]
C0058_06370
Enzymes [BR:
psnc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C0058_06370
Transfer RNA biogenesis [BR:
psnc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C0058_06370
Prokaryotic type
C0058_06370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AUO21632
LinkDB
All DBs
Position
1388083..1389141
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AA seq
352 aa
AA seq
DB search
MNDLQLLGPRAYGEALGSAVLKATAEDFQVDEVLDIPLTGEGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTGRHKR
KLQRGAHSANGFTLRLTQFAGDAAAIDARLQLIARQGIPNYFGAQRFGHNGGNVVDARDW
AARKALPEQRNVRSRLLSTARSFLFNKVLAARVADGSWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPAAGATFALEQAIADGEAELRDWLVNAGMSQERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctgcaactgctgggcccgcgtgcctatggcgaggccttgggcagcgctgtt
ctaaaggccaccgctgaagacttccaggtggatgaagtgctggatatcccgctgaccggc
gagggtgaacacctgtggttgtgggtggaaaagcgcggcctgaataccgaagaggcggcg
cggcggattgccaaggcggcgggcgtgccgttgcgtaccgtcagctacgccgggctcaag
gaccgccaggcgctgacacgccagtggttcagcgtgcagttgccgggcaaggcggacccg
gacctgagcgcggctgaaaacgacaccctgaagatcctcaagaccggccgtcacaagcgc
aagctgcagcgcggcgcgcattcggccaacggctttaccttgcgcctgacccagtttgcc
ggggatgcggcggccatcgacgcccgcctgcaactgatcgccaggcaaggcattcccaac
tatttcggcgcccagcgtttcggccataacggcggcaacgtcgtcgatgcccgtgactgg
gccgcgcgcaaggccttgccggagcagcgcaatgtgcgttcgcgcctgctctcgacggcc
cgcagtttcctgttcaataaagtgctggcggcgcgggtggccgacggttcctggcagcgc
gcccaggtcggtgacttgctggcgtttaccgacagccgcagctttttcccggcgggggag
gctgaatgcagcgacccgcgcctggcaatcctcgacctgcatcccaccggcccgcagtgg
ggcgaaggtgattcgccggcggcgggagcaaccttcgcgctggaacaggcgattgccgac
ggtgaagccgaactgcgggattggctggtgaatgccggcatgagccaggaacgtcgcatt
cttcgactgcccattggcgggttgacgtggcattatcccgaacctgacattctgcaattg
gaattcgtcctgccggctggatgcttcgccactgtcttggtgcgcgagcttgtagatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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