Pseudomonas sp. NC02: C0058_07235
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Entry
C0058_07235 CDS
T10251
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C0058_07235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psnc03400
]
C0058_07235
Enzymes [BR:
psnc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C0058_07235
DNA repair and recombination proteins [BR:
psnc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C0058_07235
Prokaryotic type
C0058_07235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AUO21793
LinkDB
All DBs
Position
1556364..1557056
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AA seq
230 aa
AA seq
DB search
MTTDDRIKLEPSWKHALRDEFDQPYMAQLREFLRQEHAAGKEIYPPGPMIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMINTTMTVERANANAHAGKGWQFFTDRIIEVVSEHQPHLVFLLWGAHAQGKQKLI
DATKHLVLTSVHPSPLSAYRGFIGCGHFSRTNKFLEQNGETPIEWRLPPV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacgaccgtatcaaactcgaacccagctggaaacacgccctgcgtgacgag
ttcgaccagccgtacatggcccagttgcgggaattcctgcgccaggagcacgcggcaggc
aaggagatctatccacccggcccgatgatcttcaacgcactcaactcaacgcccctggac
aaggtcaaggtggtgatcctcggccaggacccgtatcacggcccgggccaggcccacggc
ttgtgcttctcggtgcaaccgggcgtgccggcaccgccgtcgctggtcaatatctacaaa
gaactcaagcgtgacctgaacatcgacattcccaaccacggctacctgcaaagctgggcc
gaccagggcgtgctgatgatcaacaccaccatgaccgtggagcgcgcgaatgccaacgcc
catgcgggcaagggctggcagttctttaccgatcggattattgaagtggtgagcgagcat
cagccgcacctggtgttcttgctgtggggcgcccatgcgcagggcaagcagaagctgatc
gacgccaccaagcacctggtgctgacgtcggtgcatccgtcgccgttgtcggcctataga
gggtttattggctgcgggcatttcagccgcaccaacaagtttcttgagcagaatggcgag
acgccgatcgagtggcgattgccgccggtttga
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