Pseudomonas sp. NC02: C0058_08730
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Entry
C0058_08730 CDS
T10251
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc00071
Fatty acid degradation
psnc00280
Valine, leucine and isoleucine degradation
psnc00310
Lysine degradation
psnc00362
Benzoate degradation
psnc00380
Tryptophan metabolism
psnc00410
beta-Alanine metabolism
psnc00640
Propanoate metabolism
psnc00650
Butanoate metabolism
psnc00907
Pinene, camphor and geraniol degradation
psnc00930
Caprolactam degradation
psnc01100
Metabolic pathways
psnc01110
Biosynthesis of secondary metabolites
psnc01120
Microbial metabolism in diverse environments
psnc01200
Carbon metabolism
psnc01212
Fatty acid metabolism
Module
psnc_M00087
beta-Oxidation
psnc_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C0058_08730 (fadB)
00650 Butanoate metabolism
C0058_08730 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
C0058_08730 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C0058_08730 (fadB)
00310 Lysine degradation
C0058_08730 (fadB)
00380 Tryptophan metabolism
C0058_08730 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C0058_08730 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C0058_08730 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C0058_08730 (fadB)
00930 Caprolactam degradation
C0058_08730 (fadB)
Enzymes [BR:
psnc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
C0058_08730 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
C0058_08730 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
C0058_08730 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
C0058_08730 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AUO22075
LinkDB
All DBs
Position
1873216..1875363
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
EDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIVNWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaattg
cgtcaggccgtagacaccatcaaagcagatgcttcggtcaagggcgtgatcgtctccagc
ggcaaggacgtgttcatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagcttgtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtgccgaccgttgccgcgatcaatggcatcgccctgggcggcggtctggaa
atgtgcctggccgccgacttccgcgtgatgtctgccaccgcgaaaatcggcctgccggaa
gtcaagctgggcatctacccaggcttcggcggtaccgtgcgcctgccgcgcatcatcggt
gccgacaatgccatcgagtggattgccgccggcaaggaaaaccgtgctgaagacgcgttg
aaagtcggcgccgtggatgctgtggtggctcccgacaagctggcagaagccgcgctgaac
ctgatcaagggcgccatcagcggcgaatttgactacaaggccaagcgtcagccaaagttg
gaaaaactcaagctcaacgccatcgaacagatgatgtcgttcgaaaccgccaagggtttc
gtggctggccaggccggcccgaactacccggcgccggttgaagcgatcaagaccatccag
aaggccgcgaacttcggtcgcgacaaagccctggaagtcgaagccgctggtttcgtcaaa
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgctcgcgacgtgaaacaggctgccgtactc
ggcgccggtatcatgggcggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacggcatcgagcagggtctggcagaagccgcgaaactg
ctggtaggccgcgttgataaaggccgcatgactgcagcgaaaatggctgaagtgcttaac
ggcattcgtccgaccctgtcctacggtgatttcggccacgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaggcggtactggctgaagttgaagcccaggtgaaa
gaagacacgatcctggcgtccaacacctcgaccatttccatcaccttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggccgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaatgactgcccgggcttcctggtc
aaccgcgtactgtttccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtaatggctgaaggcttc
ccggaccgcatgaaagacgaccgccgctcggcgatcgacgcgctctacgaagccaagcgc
ctgggccagaagaatggcaagggcttctacgcctacgagaccgacaagaagggcaagcag
aagaaagtggccgacccatcggttcacgaagtactcgcgccggtcatctacgaacagcgt
gaagtgtccgacgaggacatcgtcaactggatgatgatcgccctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgttgaaaccgcagccgaggccgacatgggcctggtctac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgattccatcggtgtg
gccgagttcgttgccctggctgatcaatacgctgatctgggcccgctgtaccacccgact
gcgaagctgcgcgagatggccaagaacggccagagcttcttcggttaa
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