Pseudomonas sp. NC02: C0058_09150
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Entry
C0058_09150 CDS
T10251
Name
(GenBank) diguanylate cyclase
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C0058_09150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psnc02000
]
C0058_09150
Transporters [BR:
psnc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C0058_09150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AUO22153
LinkDB
All DBs
Position
1963672..1965186
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AA seq
504 aa
AA seq
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MQSRHLKLLAAATLTAWSLTAGIAHAAGVLTIGCREDSTTFDPIKSAQNRDTWVFANVYD
TLVRVDNLGTKMEPGLAESWDISKDGLTYTFKLRAAKFSDGSPITADDAAFSLLRIRDNK
ASLWSDPFSLINTAKASDPQTLVVTLKTPAVAFLSQLASPTVSILSEKAMTKMGEDAYSE
NPVTSGAFTVDEWRKGDRVILKKNPNFWQASNVSLDGVEWVSVTDDNTRMRMVQNNELDT
AIFVPFSRVEELKKDKNVVVHSDPSTREDHLLINHAHGLLAKPEVRQALDMAIDKQSLVK
TATFGQGTVAYSYIPKGSLYHYANNLQRPYDPTEAKKLLAAAGAQDLKLNYVVNAGNEAD
EQIAVMIKDQLAKVGVTANLQKVDPTQSWQMLVDGDYDISVMYWTNDILDPDQKTTFVLG
HDTNQNYMTRYKNDKVKDLVAAARIEADPVKREQMYVDLQKMAKQDVNWIDLYYSPYINI
SRKNVSNFLQNPLGRFTLEEVVKN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcccgtcacttgaagttgctcgccgccgccacactcaccgcctggtcgctgacc
gccggtattgcccacgccgcaggtgtgctgaccatcggctgccgcgaagacagcaccacg
tttgacccgatcaaaagcgcgcagaaccgcgatacctgggtgttcgccaacgtctacgac
accctggtgcgcgtggacaacctgggcaccaagatggaaccggggctggcagaaagctgg
gacatttccaaggacggcctgacgtacaccttcaagctgcgtgccgcgaagttctcggat
ggctcgccgatcaccgccgacgacgctgccttcagcctgttgcgcatccgcgacaacaag
gcctcgctgtggagcgacccgttcagcctgatcaacaccgccaaggccagcgacccgcaa
accctggtagtgaccttgaaaaccccggcggtggccttcctctcgcaactggcttcgccg
acggtgtcgatcctgtcggaaaaagccatgaccaagatgggcgaagacgcctactcggaa
aacccggtgacctccggcgcgtttaccgtggacgagtggcgcaagggcgatcgggtgatc
ctgaagaagaacccgaacttctggcaggccagcaacgtcagcctggatggtgtggaatgg
gtctccgtcaccgacgacaacacccgcatgcgcatggtgcagaacaacgagctggacacg
gcgatcttcgtcccgttttcccgggttgaagagctgaaaaaagacaagaacgtggtggtg
cactctgatccgtccacccgtgaagatcacctgttgatcaaccacgcccacggcctgctg
gccaagccggaagtgcgccaggcgctggacatggccatcgataaacaatcgctggtgaaa
accgccaccttcggccagggcaccgtggcctattcctacatcccaaaaggctcgctgtac
cactacgccaacaacctgcaacgcccgtatgacccgaccgaagccaagaagctgctggcg
gctgccggcgctcaggatttgaagctcaactacgtggtcaacgccggcaacgaagccgac
gagcagattgcggtgatgatcaaggatcaactggccaaggtcggtgtgacggccaacctg
caaaaggtcgacccgacccaaagctggcagatgctggtggacggtgattacgatatttcg
gtgatgtactggaccaacgacatcctcgacccggaccagaagaccaccttcgtgctgggc
cacgacaccaaccagaactacatgacccgctacaagaacgacaaggtcaaggacctggtg
gccgcggcgcggatcgaggcggacccggtcaagcgtgagcagatgtacgtcgacctgcag
aaaatggcgaaacaggatgtgaactggatcgacttgtactacagcccgtacatcaacatc
tcacgcaagaacgtgagcaacttcctgcaaaacccgttggggcgcttcacgcttgaggaa
gtggtgaagaactaa
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