Pseudomonas sp. NC02: C0058_11405
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Entry
C0058_11405 CDS
T10251
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
psnc Pseudomonas sp. NC02
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psnc03400
]
C0058_11405
Enzymes [BR:
psnc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
C0058_11405
DNA repair and recombination proteins [BR:
psnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
C0058_11405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AUO26542
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Position
complement(2401958..2403520)
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AA seq
520 aa
AA seq
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MFPGSAVVTKAVRNLCLVLGDQLSFDLASLDGLDSQRDAVLMVEVMEEASHVPHHPQKIV
LVFSAMRHFAQALQQRGVRVQYVTLDDPQNTGSVPGELRRWQSLMQPREIHLTECGDWRL
EQSLKDCGLPIQWHADHRFLCSRDAFAAWASGKKQLRMEFFYREMRRKSGLLLNGDGTPV
GGAWNFDADNRKALPKGTKAPYPARFSSDSITQDVLALVGKHFSSHYGSLDTFDYPVTHA
DAQALWDYFLDYGLAGFGDYQDAMASDEPFLLHARISAALNIGLLDLRQLCSDVEAAYWS
GSIGLNAAEGFIRQLIGWREYVRGVYWLKMPDYAAGNAFGNSRPLPEFYWTGETQMNCMR
QAIGQSLKHAYAHHIQRLMVTGNFALLAGIVPSQICEWYLAIYMDAFDWVELPNTLGMVM
HADGGYLGSKPYCASGQYIKRMSDYCRDCAYKVTESTADNACPFNALYWHFLMRHGDLLR
GNQRMAMLYKNLDRMPESKQDALWKRGQRLLAKLDAGETL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
attttccctggaagcgccgtggtgaccaaggcagttcgaaacctgtgcctggtgctgggc
gaccagttgtcgtttgacctggcctcactggatgggctggacagccagcgcgatgcggtc
ttgatggtcgaggtcatggaggaagccagccatgtgccccaccatccgcaaaaaatcgtc
ctggtcttcagcgccatgcgccattttgcccaggcgttgcagcagcgtggcgtgcgggtg
cagtacgtcaccctggacgatccgcaaaacaccggctcggtgcccggcgagttaaggcgc
tggcaatcgctgatgcaaccccgggaaatacacctgaccgaatgcggtgactggcgtctg
gagcaatccctgaaggactgcggtttgccgatccagtggcatgccgaccaccgattcctg
tgcagccgtgacgcgttcgccgcttgggccagcggtaaaaaacagctgcgcatggagttc
ttctaccgggagatgcgccgcaagagtgggctcttgctcaacggtgacggtacgccggtg
ggcggcgcctggaactttgatgcggacaaccgcaaggcattgcccaagggcaccaaggcg
ccctacccggcgcgcttcagctcggactcgatcacccaggacgtgctggcgctggtaggt
aaacacttcagcagccactacggttccctcgacaccttcgattaccccgtgacccacgcc
gacgcgcaggccctctgggactactttctggattatggcctggctggattcggtgattac
caggacgccatggccagcgacgagccgttcctgcttcacgcccgtatcagcgcagccctg
aacatcggcctgctggacctgcgccagctgtgcagcgatgtagaggcggcttattggtcg
ggcagcatcgggctgaacgctgccgaagggtttatccgccaactgattggctggcgtgaa
tatgtacgcggcgtgtactggctgaagatgcccgactatgccgcaggcaatgcattcggc
aacagccgcccgctgccggagttctactggacgggcgagacgcaaatgaactgcatgcgc
caggcgatcggccagagcctgaaacatgcctatgcccatcacatccagcggctgatggtc
accggcaatttcgccctgctggccggcatcgtgcccagccagatatgcgagtggtacctg
gcgatctacatggacgcgttcgactgggtcgagctgcccaacaccctgggcatggtgatg
catgccgatggcggttacctgggttccaagccttattgcgcgagcggccaatacataaag
cgcatgtcggactactgccgcgactgtgcgtacaaagtcacggaaagtaccgctgacaat
gcctgcccgttcaatgcgctttactggcactttctgatgcgccacggcgacctgctgcgg
ggcaatcagcgcatggccatgctctataaaaatctcgaccgcatgcctgaatccaagcag
gacgcgctgtggaaacggggccagaggctgctggccaagttggatgcgggtgaaacgctg
tga
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