Pseudomonas sp. NC02: C0058_11815
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Entry
C0058_11815 CDS
T10251
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psnc Pseudomonas sp. NC02
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psnc03000
]
C0058_11815
Transcription factors [BR:
psnc03000
]
Prokaryotic type
Helix-turn-helix
Other families
C0058_11815
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
AAA_2
PAS_4
HTH_23
HTH_30
HTH_50
AAA_5
AAA_16
HVO_A0261_N
HTH_22
TTHA0829-like_ACT
Motif
Other DBs
NCBI-ProteinID:
AUO22641
LinkDB
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Position
complement(2484704..2486569)
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AA seq
621 aa
AA seq
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MLAVNSKDHVDCVSRVVRNADRLPQAPVPSLIFDSWRRSMEQHHLDPGSLQGPRILTSTL
LKECRERAELFMRIASEEVGQIHNRVRHADYCVMLTDAQGQTIDHRVDAGIRNDCRKAGL
YLGTCWSEAEEGTCGVATVLTSKAAVTVHKRDHFRAAFIGLTCSAAPIFDPQGNLLGVMD
ASALKSPDDRRSQHLVRQMVAQSARAIENAFFMHSARQHWMLQAHSTPGYVDSQPDMLLA
WDQDGRLQALNSKARQALRLRFGQLPEHIGEVFDLDALRAVTDQSTQQLHWLGEPGALQV
RVSAPRRKAARATVSSSHQVDPRVEEHLRLAVRVKDRNLPVLVQGETGAGKEVFARQLHE
RSARRDGPFVAVNCAAIPENLIESELFGYVAGAFTGASSKGMTGLLLQADGGTLFLDEIG
DMPLALQTRLLRVMAEGEVAPLGGAKTRAVDIQVICASHRDLAALVSAGSFREDLYFRLG
CARFCVPPLRERMDKLALINRLLEQEARHSGVAVGIAAAALESLLGYAWPGNVRQLRHVL
AYACAVCDGGTIQLADLPVEVRGNAVAVETSESVSPERQLVLDALIRHRWKPLAAAQALG
ISRATLYRRVNQLGIDMPGKH
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgtgaactccaaggaccatgtcgactgtgtcagccgcgtggtacgcaacgcc
gaccgcctgccccaggctccggtgccgtcgctgatttttgattcctggcgccgctccatg
gagcagcaccacctcgaccccggttcactgcaagggccgcgcatcctcaccagcaccctg
ctcaaggaatgccgcgaacgcgccgaactgttcatgcgcatcgccagcgaggaagtcggg
cagattcacaaccgggtgcgccacgccgattactgcgtgatgcttaccgacgcccagggc
cagaccatcgaccatcgtgtggacgccggcattcgtaacgactgccgcaaggccggcctg
tacctgggcacctgctggtcggaagccgaggaaggcacctgcggcgtggccacggtgctg
accagcaaggccgcggtcaccgtgcacaagcgcgaccactttcgtgcggcgtttatcggc
ctgacctgctctgccgcacccatctttgatccccagggcaacctgctgggcgtgatggac
gcctccgccctgaaatcgccggatgaccggcgcagccagcacctggtgcggcagatggtg
gcgcaaagcgcgcgggccatcgagaacgcgtttttcatgcacagcgcccggcaacattgg
atgttgcaggcccacagcacgcccggttacgtcgacagccagccggacatgctgctggcg
tgggatcaggatgggcggctgcaagccttgaacagcaaggcgcggcaggccctgagattg
cgcttcgggcagttgccggagcatatcggcgaagtgtttgacctggacgcgttgcgcgcc
gtgaccgatcaatcgacgcagcagttgcattggctcggcgagccgggggcgttgcaggta
cgggtcagcgcgccgcggcgtaaggctgcacgtgcgacggtgtcttcgagtcatcaggta
gacccgcgagtagaagaacatctgcgcctggccgtgcgggtcaaggaccgcaacctgccg
gtgctggtccagggcgaaaccggcgccggcaaggaagtgtttgcccgccagttgcatgaa
cgcagcgcccgtcgcgacggaccctttgtggcggtgaactgcgcggcgatcccggaaaac
ctgatcgagagcgaactgttcggctacgtggccggggcatttaccggtgcctccagcaag
ggcatgaccgggctgctgttgcaggccgatggcggcacgttgtttctcgacgagatcggc
gacatgccgctggcgttgcagacgcgactgctgcgggtaatggccgaaggtgaagtggcg
ccgctgggcggggcaaaaacccgggcggtggatatccaggtgatctgcgccagccatcgg
gacttggcggcgctggtgagtgctggaagctttcgcgaggatttgtatttccggttgggc
tgtgcgcggttctgtgtgccgccattgcgcgagcgcatggacaaactggcattgatcaat
cggcttctggagcaggaggcgcggcacagcggtgttgcggtcgggatcgcggcagcggcg
ctggagtcgctgctgggttatgcctggccggggaatgtgcggcaactgcggcatgtgttg
gcgtatgcgtgtgcggtgtgcgatggcgggacgattcaactggcggatttgccggtggaa
gttcgcggtaacgcggttgcggtggaaacatcggaaagcgtcagcccggaacggcagttg
gtgctggacgcactgattcggcatcgatggaagccgctggcggcggcgcaggcgttgggg
atttccagggcgaccttgtatcggcgggttaaccagctgggtatcgacatgcccggcaag
cactga
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