Pseudomonas sp. NC02: C0058_12460
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Entry
C0058_12460 CDS
T10251
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
psnc Pseudomonas sp. NC02
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psnc03000
]
C0058_12460
Transcription factors [BR:
psnc03000
]
Prokaryotic type
Helix-turn-helix
GntR family
C0058_12460
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
MarR_2
HTH_24
HTH_IclR
HTH_Crp_2
TrmB
Fe_dep_repress
DUF6880
HTH_CodY
HVO_A0261_N
HTH_11
HTH_36
GMT-wHTH
HTH_5
HTH_27
HTH_41
MarR
FliX
EAD11
HTH_28
Ribosomal_S25
EAP30
HTH_23
HTH_20
PLU-1
HTH_29
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
AUO22754
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Position
complement(2628236..2628988)
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AA seq
250 aa
AA seq
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MKRLPLDDSFKVNHNPVTLREIVLAKLRSAIMNFQLLPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPQVAIITLADAVDIYELRCVLEGLIVQLFTLRAKAKDIKALE
KALEENRKALKDGELQQVIDSVQGFYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQE
NRRGTSNQEMERMVQAIKSGDPLAAHQACVDHVRAAAAVALDYLKRKQEETGKIPEITLP
IALKEPRIGH
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcctgccactcgacgacagcttcaaggtcaatcacaacccggtcaccctgcgc
gaaatcgtgctggcaaaactgcgcagcgccatcatgaacttccaactgctgccgggtgac
cgcctggtggaacgcgacctttgcgaccgcctcggcgtcagccgcacctcggtgcgcgaa
gccttgcgccacctggagtccgaaggcctggtggagttcgccgatgccaagggcccgcaa
gtggcgatcatcaccctggccgatgccgtcgacatctatgaactgcgttgcgtgctcgaa
ggcttgatcgtgcagttgttcaccctgcgcgccaaggccaaggacatcaaggcactggaa
aaagccctcgaggaaaaccgcaaggccctcaaggacggtgagctgcaacaggtcattgat
tcggtacaaggattctacgacgtgttgctcgaaggctccggcaaccacgtggcggccacc
caactgcgtcagttgcaggcacgtatcagctacttgcgcgcgacctcggtatcccaggaa
aaccgtcgcggtaccagcaaccaggaaatggagcgtatggtccaggcgatcaagagcggc
gacccgctcgccgcccaccaggcctgtgtcgaccacgtgcgcgccgccgccgccgtggcc
ctggattacctcaagcgcaagcaggaagagaccggcaagatccccgagatcacactgccc
atcgccctcaaagaaccgcgcataggtcactga
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