Pseudomonas sp. NC02: C0058_15265
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Entry
C0058_15265 CDS
T10251
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C0058_15265 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psnc03400
]
C0058_15265 (xth)
Enzymes [BR:
psnc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
C0058_15265 (xth)
DNA repair and recombination proteins [BR:
psnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C0058_15265 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AUO23271
LinkDB
All DBs
Position
complement(3198080..3198898)
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AA seq
272 aa
AA seq
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MQNLKIATFNVNGIKTRLPNLLQWLEKERPDIVCLQELKAQDNAFPAGELEAAGYGSLHH
GQASWNGVAILARDSEPLLIHKGLPGAKDDSQSRYLEAAVHGVIVGCLYLPNGNPQPGPK
FDYKLAWFEHLISHAATLQASEHPVVLAGDYNVVPTDLDIYNTRSWLKDALLQPESRECF
QRLLSQGWIDSLRHLYPEERVYTFWDYFRQHWQKNSGLRIDHLLLNPVLAPYLKNVGVDA
WVRGEEHASDHAPTWIEISSRQTRSRKKPKRS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacctcaagatcgcgacattcaacgtcaacggcataaagacgcgactgcccaac
cttctgcagtggctggaaaaggagcgcccggacatcgtctgcctgcaggaactgaaggcg
caagacaacgcgttccccgctggagaacttgaggcggcgggctatggctcattgcaccat
ggccaggcatcctggaacggagtggcaattctcgcgcgggattccgaaccccttttgatc
cataagggcctgccgggagccaaggacgactcgcagtctcgatacctggaagcggctgtc
catggcgtgattgtcggatgcctgtacctgcccaacggaaacccgcaacccgggccaaaa
tttgattacaagctcgcgtggttcgaacacctgatctcccacgctgcaacactgcaggcc
agcgaacatccggtggtcctcgcgggtgactacaacgtggtgcccaccgacctggacatc
tacaacacccgctcatggctcaaggatgccctcctccagccagaaagccgtgagtgcttt
caaaggctgctttcccagggctggatcgactcgctgaggcacctgtacccggaagagcgg
gtgtacacgttttgggattatttccgtcagcattggcagaagaattccgggctgcgcatc
gaccatctgctgctcaacccggtactcgccccgtacctgaaaaacgtcggcgtagatgca
tgggtacggggtgaagagcatgccagtgatcatgcgccgacgtggatcgagatctcatca
cggcaaacccggtcaagaaagaagccaaaacgcagttga
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