Pseudomonas sp. NC02: C0058_19115
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Entry
C0058_19115 CDS
T10251
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc02025
Biofilm formation - Pseudomonas aeruginosa
psnc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
C0058_19115 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
C0058_19115 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psnc02044
]
C0058_19115 (clpV)
Secretion system [BR:
psnc02044
]
Type VI secretion system
Imp/Vas secretion system core components
C0058_19115 (clpV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_16
AAA_22
ClpB_D2-small
AAA_7
TniB
nSTAND3
NACHT
Sigma54_activat
AAA_30
Clp_N
AAA_29
AAA_18
SRP54
AAA_33
DUF6457
Hpr_kinase_C
AAA_6
DUF815
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
AUO23993
LinkDB
All DBs
Position
complement(4069772..4072336)
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AA seq
854 aa
AA seq
DB search
MMNVDLQQLIQALTASTRRDLERSAERCVTRGGGEVLVEDLLLTLLEHPEGVLMRALQDA
GVDAGELQAVLQPRVDQSASRNPVFSPALVQWLQQALLVAHLELGRREVDHGALLLALLR
NPMQHAGSRYQAVMSTLDAPRVLGFLLSENAQAAPAEAGSSLLERFTHDLTRQARDGKLD
PVLCRDNEVRQMIDTLARRRKNNPILVGEAGVGKTAIVEGLALRIVSAQVPEVLRKVRLL
TLDMGLLQAGASIKGEFERRLKGLIDEVNASPQPVILFIDEAHTLVGAGGSAGSSDAANL
LKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQVHEPTVDDAVTILRGLVPVYE
ASHGVYVRDDAVVAAAQLSARYLAGRQLPDKAVDVLDTACARVRISLVTAPDELQQLRAE
LAEGTRQQRAVRRDADAGLAIDEQVLQHLTRRLEEVEVARFQLEQRWTHQRELAEKVLSL
RQQLADAGNLGESTEALASLLAQNHQALQAIQHEQRLVSFEVCPRLVAQVISAWTGIPLE
QLAREHSAKVLNFADDLRGRILGQEGAVQVLDRCLRAVAAGVNRPDAPVGVFLLVGPSGV
GKTETAHALADLLYGGERFVTTINMSEYQEKHSLSRLIGAPPGYVGYGEGGVLTEAVRQK
PYSVVLLDEVEKADPDVLNLFYQVFDKGVANDGEGREIDFRNTLILMTSNLGSDLVTGLC
ADSQRPAVEVLHAAIRPVLTAHFKPALLARMRVVPYYPVAGAVLHQLIEHKLQRLGQRLL
QRKLAFSHAGDLVAHMAEHCSRSGSGARFVDQWIEENLLPQVVDRLLGAMAVGKSLQFVH
ARLDANGTVICEFS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgtggatctgcaacaacttatccaggcattgacggcgtccacacggcgcgac
ctggaacgcagcgccgagcgttgtgtcacccggggcggcggcgaggtcctggtggaagac
ttgctgctgacgctcctggagcatcccgagggtgttcttatgcgagcgctgcaggatgcg
ggcgtggatgccggggaattgcaggccgtgctgcaacctcgggtcgaccagagcgcgtcc
cgcaatccggtgttttcgcccgccctggtgcaatggctgcagcaggcgttgctggttgcc
catctggagctgggccgacgggaagtggaccatggcgccttgctgctcgccttgttgcgc
aacccgatgcagcacgctggcagccgttaccaggcggtgatgagcacgcttgatgcaccg
cgtgtgctcggatttctcttgagtgaaaacgcgcaggcggctccagctgaggcggggagt
tccttgctggagcgctttacccatgacctgactcgccaggcccgggacgggaaactcgac
cccgtgctctgtcgcgataacgaagtccggcaaatgatcgatacgctcgcgcggcggcgc
aagaacaaccccattctggtgggcgaggcgggtgtcgggaaaaccgcgatagtcgagggc
ctggccctgcggatcgtcagcgcgcaagtgccagaggtgctcaggaaggtgcgcctgctg
accctggacatgggcctgctgcaagccggtgccagtatcaagggtgagttcgagcgccgc
ctcaaaggcttgatcgatgaggtcaacgcctcgccgcaaccggtcatcctgttcatcgat
gaggcccataccctggtcggcgcaggcggctcggccggcagctccgatgccgccaacctg
ctcaagccagcgctggcacgaggtgagttgcgtaccatcgccgcgacgacctggtcggag
tacaagaagtacttcgagaaagacccggcgttggcgcggcgttttcagccggtgcaggtg
cacgagccgacggttgacgatgccgtgacgattttgcgtgggttggtcccggtgtatgag
gccagccacggagtctacgtgcgcgatgacgccgtggtcgccgccgcgcagctgagtgcc
cgctacctggccggccgccagttgccggacaaggctgtggacgtgctggacaccgcttgt
gcccgggtgcggatcagcctggtcacggcgccggacgaactgcagcagttgcgcgccgaa
ctggccgagggcacgcgccagcaacgtgccgtgcgcagggatgccgacgcggggttggcc
atcgatgaacaggtgctgcagcacctcacccggagactggaagaagtagaagtcgcacgg
ttccagcttgaacaacgctggacccaccagcgcgaactggccgagaaggtactctcgctg
cgccagcaactggccgacgccggtaaccttggcgaaagcactgaggctctcgcttcgctc
ctggcccagaaccatcaggcgttgcaggccatacagcacgaacagcgattggtcagcttc
gaagtatgcccacggttggtggcacaggttatcagcgcctggacgggtattcccctggag
cagcttgcccgcgaacacagcgcgaaggtcctgaactttgcggatgatctgcgtggtcgc
atcctcggccaggaaggtgccgtgcaggtcctggaccgttgcctgcgggctgtcgcggcc
ggcgtgaacaggcctgatgcccccgtgggggtatttctgttggtgggccccagtggtgtc
ggcaaaactgaaacagcccacgccctggccgacctgttgtatggcggcgagcgctttgtc
accacgatcaacatgtctgaataccaggagaaacactcactgtcccggctgatcggcgca
ccaccgggttatgtcggttacggggagggcggggtgctgactgaggcggtgcggcaaaag
ccctattcagtggtgctgctcgatgaggtggaaaaggccgatccggatgtcctgaacctg
ttttaccaggtgttcgacaaaggggtagccaatgatggagaaggacgtgaaatcgacttt
cgcaataccctgatcctgatgacttccaacctgggcagcgatcttgtcaccgggctgtgc
gccgacagtcaacgaccggctgtcgaagtactgcacgccgcgatccggccggtactgaca
gctcatttcaagccggcgctgctggcccgtatgcgagtcgtgccgtattacccggtggca
ggcgcggtgctgcaccaactgattgaacacaaacttcagcgcctgggccagcgtctgctt
cagcgcaagctcgcattcagtcacgcaggggatcttgtcgcacacatggccgagcactgt
agccgcagtgggagtggcgcgcggtttgtcgaccaatggatcgaggaaaacctgttgccg
caggtggtggatcgcctgctgggtgcgatggccgttggcaagtccctgcagttcgtccat
gccaggctggatgccaacggcaccgtaatctgtgagttcagctga
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