Pseudomonas sp. NC02: C0058_19135
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Entry
C0058_19135 CDS
T10251
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
C0058_19135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psnc02044
]
C0058_19135
Secretion system [BR:
psnc02044
]
Type VI secretion system
Imp/Vas secretion system core components
C0058_19135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
AUO23997
LinkDB
All DBs
Position
complement(4075507..4076982)
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AA seq
491 aa
AA seq
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MTTSQSPSHAPITDEYSILDNIIAQTRLSADDEAYSIAKRGVSAFIEELIKPQNKGEPVK
KRLVDRMIAEIDARLSQQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIELLSVSR
QDLLDDFEDSPEVTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVRLMQYVSSV
ACMAHAPFIAAAGPGFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVP
RFLLRTPYDPVDCPVKTFAYQEHVASSHEHYLWGNTAYAFATRLTDSFARYRWCPNIIGP
QSGGAIEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA
SSVQKPKSFGISAEGKAAELNYRLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQGNPSTEVRGRRPLRAARIVVSDVDGEPGWYRVNLSVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgactaccagccaaagcccgtcgcatgcgcccatcacggatgagtacagcattctcgac
aacatcattgcccagacccgcctcagtgccgacgacgaggcctacagtattgcaaagcgc
ggagtctcggcatttatcgaggagctgatcaaaccgcaaaacaagggcgagccggtcaag
aagcgcctggttgaccggatgattgccgagattgacgcaaggctcagccagcaaatggat
gaaatcctgcaccatcccgacttccaggcactggagtcttcctggcgtggcctgcagttg
ctggttgatcgcaccaattttcgtgaaaacatcaagatcgaactgctcagcgtctcccgc
caggatctgctggatgacttcgaggactcaccggaggtgactcagtccggactctacaag
cacatctacagtgccgaatacggtcagttcggcggccagcccgtaggggcaatcatcgcc
aattatttcctttcccccagtgctcccgatgtcaggctgatgcagtatgtttccagcgtg
gcctgcatggcccatgcaccgttcattgcggcggccggccctggtttcttcggcctggag
agctttaccggcctgcctgacctcaaggacctgaaggaccattttgaagggccgcagttt
gccaaatggcagagttttcgccagagcgaagatgcccgctacatcggcctcaccgtaccg
cgctttctattgcgtacgccgtacgatcccgttgattgtccggtcaagacgttcgcctac
caggaacatgtggccagcagccacgaacactatctgtggggtaatacggcctatgccttt
gctacccgcttgacggacagtttcgcccggtatcgctggtgcccgaacattatcggcccg
cagagtggtggtgcaattgaggacttgccgctgcatcactttcacagcatgggcgagatc
gaaaccaagattcctaccgaggtgctggtatccgaccgacgcgaatacgagctggcgcaa
gagggcttcattgccctgaccatgcgcaagggcagtgacaatgcagcgttcttttccgcc
agttcggtgcaaaaacccaagtcttttggaatcagtgccgaaggcaaggctgccgagctg
aattaccgtctcggtacccaattgccgtacatgatgatcgtcaatcgcctggcccactat
ctcaaggtcctgcagcgtgaacagctggggtcgtggaaggagcgcaccgaccttgagctg
gaactcaacaaatggattcgccaatacgtagccgaccagggcaaccccagcactgaagtg
cgtggacggcgcccgcttcgggctgcgcgcattgttgtcagtgatgtcgacggggagcct
ggctggtatcgcgtcaacctgagcgttcgcccgcacttcaagtacatgggggcagacttc
actctgtcgctcgtcggcaagctcgataaagaatga
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