Pseudomonas sp. NC02: C0058_20095
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Entry
C0058_20095 CDS
T10251
Name
(GenBank) XylR family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
psnc Pseudomonas sp. NC02
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psnc03000
]
C0058_20095
Transcription factors [BR:
psnc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
C0058_20095
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_18
HTH_AraC
Peripla_BP_4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AUO24180
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Position
complement(4266061..4267272)
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AA seq
403 aa
AA seq
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MKTVPPVHRIALLFNGNKIYDRGIITGIGNYLSSTRVSWDLFLEEDFVCRLKGIERWHGD
GIIADFDDPAMGPALAGVHVPVVAVGGSYEDERAYPRHTPYVATDNFALIKLAYEHLIEA
GLTRFACFSLPEADINRWAQEREKAFRRLLERDGLPVEVYRGLGTSAPLWDSAVEQQIAW
LHSLPKPIGIIAVSDARARQLLQACLTAGIPVPEQVALIGIDNDPLTRTLTRVPLSSVIQ
GTEKMGRTAARLLHQMLHGMPSAGSQILVPPEAVNVQTSSLHQPLGHPYVMQALHFIRQY
ACQGIKTAQVANYVGVSRSSLEAHFRSELNRSVHDEILRFKLAAAVSSLENTRAAIADIA
YDCGFKSAQYLHTVFKREFGCTPREYQVGQVERDSSDVISLSP
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaactgtcccgcctgtgcaccggattgccctgctgttcaatggcaacaagatctat
gatcgcggcatcatcaccgggatcggcaactacctgagcagtacgcgggtgtcgtgggat
ctgttcctggaagaggacttcgtctgccggctcaagggtatcgagcgctggcatggcgat
gggatcattgccgacttcgacgacccggcgatgggccccgcgttggcgggtgtgcatgtg
ccggtggtggcggtgggcgggtcttatgaggatgagcgggcttacccacggcatactccg
tacgtggccactgacaattttgctttgatcaagctggcctatgaacacctgatcgaagcc
gggctgacgcgctttgcctgtttcagcctgcctgaagccgatatcaaccgttgggcccag
gagcgcgaaaaagccttccgccgcctgctggagcgcgatggcttgcctgtggaggtgtat
cgcgggctcggcaccagcgcgccgctgtgggactcggcggtggagcaacaaattgcctgg
ttgcacagcctgcccaaacccatcggcatcatcgcggtcagcgacgcccgtgcccgccag
ttgctgcaggcctgcctcaccgccggcatcccggtgccggagcaagtggcactgatcggc
atcgacaacgaccccttgacccgcaccctgacccgcgtgccgctgagctcggtgatccag
ggcactgaaaaaatgggccgcaccgccgcgcgcctgctgcaccagatgctgcacggcatg
ccttcggcaggcagccagatcctggtgccgccggaagcggtcaacgtgcagacctcaagc
ctgcaccaacccctcggccatccctacgtgatgcaagcgctgcatttcattcgccagtac
gcctgccagggcatcaagaccgcccaggtcgccaactacgtcggcgtgtcgcggtcgtcc
ctggaagcgcattttcgcagtgaactgaaccgcagcgtccacgatgaaatcctgcgcttc
aaactcgcggctgcggtttccagcctggaaaataccagggccgcgattgcggatattgcc
tatgactgcgggttcaaatccgcccagtacctgcacacggtgttcaagcgcgagttcggg
tgtacgccgagggagtaccaggtggggcaggtcgagcgcgattcgagcgatgtcatttct
ttgtcgccttga
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