Pseudomonas sp. NC02: C0058_20605
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Entry
C0058_20605 CDS
T10251
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc00300
Lysine biosynthesis
psnc00470
D-Amino acid metabolism
psnc01100
Metabolic pathways
psnc01110
Biosynthesis of secondary metabolites
psnc01120
Microbial metabolism in diverse environments
psnc01230
Biosynthesis of amino acids
Module
psnc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C0058_20605
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C0058_20605
Enzymes [BR:
psnc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
C0058_20605
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Phage_Bbp19
Motif
Other DBs
NCBI-ProteinID:
AUO24272
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Position
complement(4372044..4373033)
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AA seq
329 aa
AA seq
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MSVFYDARGNIYGVVSPEHLRSKGIDVPDRADLAAGTRGVWALAAIAAECGWDELPRPAE
AKAHRCDGLLVGPFQAAPPFDLLIVNTDGSLAERSGNGLTIFAQSLTDQGLMAQGCELRV
HHDKTDALSPVVTRVEPAEYEQVQGFWLALGRPEFGPLAVGAVGVGAVSLEGTEVSHVSP
LAALNPEWNHSQFVRVGNPHCVTLVQDASALPDNAQLHRSAWFDPLRAIAFAPPAGAGQP
CISGVNLQWVARDSGNRVIARVFERGEGPTASSGTSASAVACAAWSVGWVTAGQVAVVMP
GGTAPVRLQAEPGELLSVSLFGTARLQEV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttttctatgacgcccgcggcaatatctacggcgtagtgagcccggagcattta
cgcagcaagggtatcgacgtgccggaccgtgccgacttggccgctggcacccgaggtgtt
tgggcattggcggcgattgccgccgagtgcggttgggatgagttgccgcgcccggcagag
gccaaggcgcatcgctgtgacggcttgttggtggggccgttccaggccgcgccgcctttt
gacctgttgatcgtcaacaccgacggttccctggccgaacgcagtggcaatggcctgacg
atcttcgcccagtcgttgaccgaccagggattgatggcgcaaggctgtgagttgcgggtg
catcacgacaagacagacgcactgtcgccggtggttacgcgggttgagccggcggagtac
gaacaggtgcaaggcttttggctggcgctggggcgtcccgagttcgggcctttggcggta
ggggctgttggtgtgggcgcggtctcgcttgagggaactgaggtgagccatgtttcgcca
ctggctgcgctcaaccccgagtggaatcacagccagtttgtgcgtgtgggcaacccgcat
tgtgtgacgctggtacaggacgcgtcagcgttgccggacaacgcccagctgcatcgatca
gcctggttcgatccgctgagggcgattgctttcgcaccacctgccggggccggccaacct
tgtatttccggggtcaacctgcaatgggtcgcccgggattcaggcaatcgcgtgatcgcg
cgagtgtttgagcgtggtgaggggcccacggcgtcctccgggaccagcgccagtgcggtg
gcatgcgccgcctggtctgtaggatgggtgacggcgggtcaggtggcggtggtgatgccg
ggcggtaccgcacccgtacggttgcaagcagagccgggtgagttgctgagcgttagcctg
ttcgggactgcgcggctgcaggaagtttga
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