Pseudomonas sp. NC02: C0058_25040
Help
Entry
C0058_25040 CDS
T10251
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc00061
Fatty acid biosynthesis
psnc00071
Fatty acid degradation
psnc01100
Metabolic pathways
psnc01212
Fatty acid metabolism
psnc02024
Quorum sensing
psnc04146
Peroxisome
Module
psnc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C0058_25040
00071 Fatty acid degradation
C0058_25040
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C0058_25040
09145 Cellular community - prokaryotes
02024 Quorum sensing
C0058_25040
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psnc01004
]
C0058_25040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psnc04147
]
C0058_25040
Enzymes [BR:
psnc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C0058_25040
Lipid biosynthesis proteins [BR:
psnc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C0058_25040
Exosome [BR:
psnc04147
]
Exosomal proteins
Exosomal proteins of breast milk
C0058_25040
Exosomal proteins of breast cancer cells
C0058_25040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
AUO25080
LinkDB
All DBs
Position
complement(5339663..5341354)
Genome browser
AA seq
563 aa
AA seq
DB search
MIEDFWKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTSVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKAIKFNDVLAKGHGQPVNEVSPASDEVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLSAMVKELSKWK
FSGFVGLNTLFVALCNNDAFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCSICEGYGM
TETSPVATVNPIQNIQIGTIGIPVPSTLCKVITDDGVELALGEVGELCVKGPQVMKGYWQ
REDATAEILDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEHIKIFIVVKPGASLTKDQVMEHMRANVTGYKVPKAVEFRDALPT
TNVGKILRRELRDEELKKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttttggaaggataagtaccccgccgggattgctgcagaaatcaatcca
gacgagtatccgaatattcaggcggtactgaagcagtcctgccaacgcttcgccaacaaa
ccggctttcagcaacctgggcaagacaatcacctacggtgaactgtacgaactgtccggc
gccttcgccgcttacctgcaacagcataccgacttgcagcccggtgatcgaatcgccgtg
caactgcccaacgtcctgcaatacccggtcgccgtgttcggcgccatccgtgccggcttg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccaattcaacgac
tccggtgccaaggccctggtctgcctggccaacatggcgcacctggctgaaaaagtcgtg
cccaagacttccgtccggcacgtgatcgtcaccgaagtcgccgacctgttgccgccgctc
aagcgcctgctgatcaacagcgtcatcaagtacgtgaagaagatggtcccggcctatcac
ttgcccaaggcgatcaagttcaacgacgtattggccaagggccacggccagccggtgaac
gaagtcagccccgccagcgacgaagtcgccgtgctgcaatacaccggcggcaccacgggc
gtggccaagggcgcgatgctgacccaccgcaacctcgtcgccaacatgctgcagtgcaag
gcgctgatgggctccaacctgaatgaaggttgcgagatcctgattaccccgctgccgctg
taccacatctatgccttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgtcggcgatggtcaaggaactgtcgaagtggaag
ttcagcggctttgtcggcctgaacaccctgtttgttgccctgtgcaacaacgacgccttc
cgcaagctggatttctcggcgctgaaggtcaccctgtcaggcggcatggccctgcaactg
gcggcggccgagcgctggaaagcggtcaccggctgctccatctgcgaaggttacggcatg
accgaaaccagcccggtggccaccgtgaacccgatccagaacatccagatcggcaccatc
ggcattccggtgccgtcgaccctgtgcaaggtcatcaccgatgacggcgtcgagctggcg
ctgggtgaagtgggcgaattgtgcgtcaagggcccgcaagtgatgaagggctactggcag
cgcgaagacgccaccgccgagatcctcgacagcgaaggctggctgaagaccggtgacatc
gcgatcatccagccagatggctacatgcgcattgtcgaccgcaagaaggacatgattctg
gtctccggtttcaacgtctaccccaacgagctggaagacgtgctggcgaccctgccgggc
gtgctgcaatgcgcggccattggtgtgccggacgagaagtccggggaacacatcaagatc
ttcatcgtggtcaagccgggtgccagcctgaccaaagaccaggtgatggagcacatgcgc
gccaacgtcaccggctacaaggtgcccaaggccgtggaattccgcgatgcgctgccgacc
accaacgtgggcaagatcctgcggcgtgagttgcgggatgaagaactgaaaaagctgggt
ttgaagaagtaa
DBGET
integrated database retrieval system
