Pseudomonas sp. NC02: C0058_25970
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Entry
C0058_25970 CDS
T10251
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psnc Pseudomonas sp. NC02
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psnc03009
]
C0058_25970
Enzymes [BR:
psnc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C0058_25970
Ribosome biogenesis [BR:
psnc03009
]
Prokaryotic type
ribosomal protein modification factors
C0058_25970
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
CLP1_P
Matrix_Paramyxo_N
DUF730
Motif
Other DBs
NCBI-ProteinID:
AUO25251
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Position
5529025..5530365
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AA seq
446 aa
AA seq
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MSTTIAKANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGAIRNVHPSVLAVTGPQQYEQVVNAVHDVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSSLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKILKAMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDAAIVPDDVK
QDRWERFMAHQQAISSARLQLRIGREIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIDDAS
GLKPGDKVWCTVTDADEYDLWAEKRA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccatcgcaaaagccaaccccaaggtcggctttgtatccctgggttgccca
aaggctctggtcgactccgaacgcatccttacgcaactgcgcatggaaggctatgacgtc
gtgtccacctaccaggacgcggacgtggtggtggtcaacacctgtggcttcatcgactcg
gccaaggccgagtccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtgatc
gtcaccggctgcatgggcgtggaagaaggcgccatccgcaacgtgcacccaagcgtgctg
gccgtgaccggcccgcagcagtacgagcaagtggtcaacgccgtgcacgacgtagtgccg
ccgcgccaggaccacaacccgctgatcgacctggtgccgccgcagggcatcaagctgacg
ccgcgccactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaaactggtgagccgcccggtaggcgacgtgctggacgag
gcccagcgcctggtcaaatccggcgtgaaagagctgctggtgatctcccaggacaccagc
gcctacggcgtcgacgtcaaataccgcactggcttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactctgcgaagccctgagcagcctcggcgtatgggtgcgcctgcactac
gtttacccgtacccgcacgttgacgagttgatcccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaaatcctcaaggccatgaaacgc
ccggccttcgaagacaagaccctggcgcgcatcaagaactggcgcgagatctgcccggac
ctgatcatccgctccaccttcatcgtcggcttccccggcgaaaccgaagaagacttccag
tacctgctggactggctgaccgaggcccagctggaccgcgtcggctgcttccagtactcg
ccggtggaaggtgctccggccaacctgctggacgctgccatcgtgccggacgacgtcaag
caggaccgttgggagcgcttcatggcgcaccagcaggccatcagctcggcgcgcctgcaa
ctgcgcatcggccgtgagatcgaagtactgatcgacgaagtcgacgagcaaggcgctgta
ggccgctgcttcttcgatgcaccggaaatcgacggtaacgtgttcatcgacgatgccagc
ggcctgaagccgggcgacaaggtctggtgcaccgtgaccgacgccgacgagtacgacctg
tgggctgaaaaacgcgcataa
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