KEGG   Pseudomonas sp. NC02: C0058_28390
Entry
C0058_28390       CDS       T10251                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psnc  Pseudomonas sp. NC02
Pathway
psnc03030  DNA replication
psnc03430  Mismatch repair
psnc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psnc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C0058_28390
   03430 Mismatch repair
    C0058_28390
   03440 Homologous recombination
    C0058_28390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psnc03032]
    C0058_28390
   03400 DNA repair and recombination proteins [BR:psnc03400]
    C0058_28390
Enzymes [BR:psnc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C0058_28390
DNA replication proteins [BR:psnc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     C0058_28390
DNA repair and recombination proteins [BR:psnc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     C0058_28390
SSDB
Motif
Pfam: RNase_T Rv2179c-like Ribosomal_L26 RNase_H_2
Other DBs
NCBI-ProteinID: AUO25707
LinkDB
Position
complement(6042186..6042797)
AA seq 203 aa
MERIAVIDFETTGIQPSSSCRATEIAVVILEQGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRTAPSAERVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLMPAAPNHKLGTLTSFAQLPHTGKAHRAMADAEMAANLTAHLAEELRRTHGLRELSHE
LLCSLQKVPAAKINDHLKKHRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatccagccgagcagcagctgc
cgggccacggaaatcgccgtggtcatcctggagcagggccagatcgtggaccgctaccag
agcctgatgaacgccggcgtgcgtgtgccggggtttatcgagcaactgaccggcatcagc
aacgccatgctgcgcaccgcaccgtcggcggagcgggtgatgaacgaggtgaacgagttt
gtcggcaccacgccgctgctggcccacaacgccgcgtttgaccagaagttctgggatttc
gagctggggttgatccggcgtacgcgtttgcagaagtttgcctgttcgctattgctggcg
cgacgcttgatgccggcggcgccgaaccacaagctgggtaccctgacctcgtttgcccaa
ctgccccacaccggcaaggctcaccgggcgatggcggacgcggagatggcggcgaacctt
accgctcacctggccgaggaactgcgtcgcacccacgggttgcgggagttgtcacacgaa
ttgctgtgcagcttgcagaaggttccggcggcgaagatcaatgatcatctgaagaagcat
cgcgggttctaa

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