Pseudomonas sp. NC02: C0058_28595
Help
Entry
C0058_28595 CDS
T10251
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc00550
Peptidoglycan biosynthesis
psnc01100
Metabolic pathways
psnc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C0058_28595 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C0058_28595 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psnc01011
]
C0058_28595 (mrdA)
Enzymes [BR:
psnc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C0058_28595 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psnc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
C0058_28595 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AUO25744
LinkDB
All DBs
Position
complement(6084488..6086386)
Genome browser
AA seq
632 aa
AA seq
DB search
MTQPIRIKDHEKDARLVRARVVFGAILVVALLGVLIARLYFLQVIQYDYHSTLSENNRVH
VQPIPPTRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQQILDVIVEVLQLTPEDRVIFE
KRMKQGRRPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYM
GRINEKELKTLDPVNYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTD
PVPGKDIVLSLDIKLQEAAEMALGGRRGAVVALDPSTGEVLAMVSQPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVTASSRVFDPGYYMLPNY
DHKYRNWNRTGDGYVDLDTAIMRSNDTYFYDLAHKLGIDRLSAYMGKFGLGQKVSLDMFE
ESPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVANKGVWNRPHL
AKTIEGERPVDENPIPDIVLRDPSDWTKVNHGMQQVMHGARGTARKAAAGAQYRIAGKSG
TAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPADNPKIVVAVMVENGESGSGVAAPVVR
QIMDAWLLTEDGKLKPEYGGTPSSVEATALEE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccgatccgcatcaaggaccacgagaaagacgcacgtcttgtacgcgcgcgg
gtggtctttggcgcgattttggtggtggcattgctgggggtgctgattgcgcgcctgtat
ttcctgcaggtgatccagtacgactatcactccacattgtcggaaaacaaccgggtgcac
gtgcagccgattccgccgacccgtgggctgattttcgaccgcaatggcgtggtggtagcg
gataaccggcccagcttcagcctgagcatgacccgcgaacgctccggtgactggcagcag
atcctcgatgtgatcgtcgaggtgctgcaactgacgccggaagaccgggtgattttcgaa
aagcgcatgaaacaggggcgccggccgtttgagccggtgccgatcctgttcgagctgacc
gaagagcagatcgcccggatcgcggtgaaccagttccgtctgccgggtgtggaagtggtg
gcgcagttggttcgccactacccgcaaggggcgcactttgcgcattcggtcggctacatg
ggccggatcaacgagaaagagctgaagaccctcgacccggtcaactacagcggcacccac
catatcggcaagaccggcatcgagcgtttctacgagccggaactgcacggccaggtgggt
tacgaggaagtcgagaccaacgcccgtggccgcgtgctgcgggtgctcaagcgtaccgac
ccggtgcccggcaaggacatcgtgctgagcctggacatcaagttgcaggaagcggcggag
atggccctgggcgggcgtcggggtgccgtggtggcactggatccgagcactggcgaagtg
ctggcgatggtcagccagccaagttttgaccccaacctgtttgtcaccgggatcagcttc
aaggcctacgccgagctgcgtgattccatcgaccggccgctgttcaaccgcgtattgcgc
ggcctgtatccgccgggctcgaccatcaagccggcggtagcgattgccggcctggactcg
ggcgtggtcacggcatcgagccgggtgttcgaccccggctactacatgctgcccaactac
gatcacaaataccgtaactggaaccgcaccggcgacggttatgtggacctggatacggcg
atcatgcgttccaacgacacctacttctatgacctggcccacaagctggggattgatcgg
ctgtcggcctacatgggcaagttcggccttggtcagaaagtctccctggacatgttcgaa
gagtccccgggcctgatgccgtcccgcgagtggaagcgtgcgacccggcgccaggcgtgg
ttcccgggcgaaaccctgatcctggggatcggccagggctacatgcaggccacgccgctg
caactggcccaggccaccgcactggtggccaacaagggtgtgtggaaccgcccgcacctg
gccaagaccatcgagggcgaacgcccggtggacgaaaacccgattcccgacattgtgctg
cgcgacccgtccgactggaccaaggttaaccacggcatgcagcaagtgatgcacggcgcc
cggggtaccgctcgtaaagcggcagccggcgcgcaataccggattgccggcaagagcggt
acggcccaggtggtcgcgatcaagcagggcgagaaatacgaccgctccaaggttcaggaa
cgccaccgtgaccacgccttgttcgtcggctttgctccggccgacaacccgaagatcgtc
gtggcggtgatggtcgagaacggtgaatccggttccggcgtagcagcgcccgtggtgcgg
cagatcatggatgcctggctgttgaccgaagacggcaagctcaagcccgaatatggcggc
accccatccagtgtggaggctacggcccttgaagagtaa
DBGET
integrated database retrieval system
