Pseudomonas sp. NC02: C0058_29875
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Entry
C0058_29875 CDS
T10251
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc03030
DNA replication
psnc03430
Mismatch repair
psnc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C0058_29875
03430 Mismatch repair
C0058_29875
03440 Homologous recombination
C0058_29875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psnc03032
]
C0058_29875
03400 DNA repair and recombination proteins [BR:
psnc03400
]
C0058_29875
Enzymes [BR:
psnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C0058_29875
DNA replication proteins [BR:
psnc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C0058_29875
DNA repair and recombination proteins [BR:
psnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C0058_29875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AUO25977
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All DBs
Position
6341113..6341820
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AA seq
235 aa
AA seq
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MSWFGWLRKPKPGLDAAQQRRVEQLPTPGELGDGSLRAQRWVVVDLETSGLNLNRDQVLS
IGAVVIEDGAVDFSQLFERTLHRAETKLNPSVLIHGLGPSAIAAGSDPAEALMDFMEFVG
DSPLLAFHAPFDQHMLCRALKDSLGYRLNHPFLDVADIAPLLCPDANIREAGLDDWITHF
KLQVGERHHASADALATAELMLILFSRARQQQIDSPHALQQRLGQWKRRKQAPSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagctggtttggctggttgcgcaaacccaaacctggcctggatgcggcgcaacaacgg
cgcgtcgagcaattgcccacacctggggagctgggggacggatcgctgcgggcccagcgc
tgggtggtggtggacctggaaaccagcggcctgaacctcaatcgtgaccaggtgctttcg
attggcgccgtggtgatcgaggacggcgcagtggacttctcgcaattgttcgaacgcacc
ctgcaccgggccgagaccaagctcaaccccagcgtgctgatccatggcctggggcccagc
gccattgcggcgggcagtgacccggcagaggcgctgatggacttcatggagtttgtcggc
gacagcccgctgctggcgtttcatgcgcccttcgatcaacacatgctgtgccgggcactc
aaggacagcctgggctatcgcttgaaccacccgttcctggacgtggccgacatcgccccg
ctgctgtgccccgacgccaacatccgcgaagccgggctggatgactggatcacgcatttc
aagctgcaagtgggcgagcgtcaccatgccagtgcggatgcgctggcaacggcggaactg
atgctgattttgttcagccgtgcacggcagcagcagatcgacagcccgcacgcgttacaa
cagcgcctgggccaatggaaacgccgcaagcaagccccctcattctaa
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