Pseudomonas sp. NC02: C0058_29940
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Entry
C0058_29940 CDS
T10251
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
psnc Pseudomonas sp. NC02
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psnc03021
]
C0058_29940
Transcription machinery [BR:
psnc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C0058_29940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AUO25990
LinkDB
All DBs
Position
6354210..6354845
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AA seq
211 aa
AA seq
DB search
MNAQAGLTSACPLYRAPSHRSVASAWRSPISTHDADQLRQLLAQCSLGNRQAFETLYRSV
SPRLHGVALRFMGRKDLAEEVLQESFVRIWYNASRYEAHLSAPMTWMVNITRNLAIDQLR
KHREQPLNEGQEDATADESPSAHEQLDSEREALALNRCLDSLEGMQRQSITVAYFQGLSC
SELAEHLAAPLGSVKSWIRRGMERLRRCLES
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccaagctggactaacctcagcctgccctctttaccgtgcgccgtcccatcgc
tctgttgcaagcgcctggagaagtcctatttcgacccacgatgcagatcagctacggcaa
ttgctggcccagtgttcactgggtaatcgccaggcgttcgaaacgctctatcgcagcgtt
tccccgcgtttgcatggtgttgccttgcgtttcatgggtcgcaaggatctggccgaggag
gtgttgcaggaaagcttcgtgcgcatctggtacaacgcctcacgctatgaggcccatctg
tcggcgcccatgacctggatggtcaatatcacccgcaacctggcgatcgaccagttgcgc
aaacaccgcgaacaacccttgaacgaaggccaggaggacgccacggccgacgaaagcccc
agcgcccatgaacagctcgacagcgagcgtgaagccctcgccctgaaccgctgcctcgac
agcctcgaaggcatgcagcgtcaatcgatcaccgtggcttacttccagggcttgtcgtgc
tcggaattggccgaacatctggccgcgcccctgggctcggtcaaatcctggattcgccgc
ggcatggagcgcttgcgtaggtgccttgaatcatga
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integrated database retrieval system
