Pseudomonas sp. NC02: C0058_30195
Help
Entry
C0058_30195 CDS
T10251
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
psnc Pseudomonas sp. NC02
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psnc03009
]
C0058_30195
Enzymes [BR:
psnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C0058_30195
Ribosome biogenesis [BR:
psnc03009
]
Prokaryotic type
rRNA helicases
C0058_30195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
AUO26036
LinkDB
All DBs
Position
6406890..6408275
Genome browser
AA seq
461 aa
AA seq
DB search
MTTIATAFNTLPLSAAMLANLDSLGYVEMTQIQAQSLPVILKGLDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVMCPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSLGPQIA
SLEHGAHVIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLDMGFYDAIEDIISKTPAR
RQTLLFSATYPVSIKQLASKFMRAPQQVKAEAFHSDDQIEQRFYEISPEERMDAVTKVLA
HFRPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGETGIAISLVAPSEAHRAQAIE
QLQKSPLNWDQLDNLKPQSGGPLLPVMSTLCIAAGRKDKVRPGDILGALTGEAGIPGAQV
GKIAIFDFQAFVAVERGIAKQALQRLNDGKIKGRSLRVRIL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgactaccatcgccaccgcttttaatactttgcccctgtccgccgccatgctggctaac
ctcgactcgctgggttatgtcgagatgacgcagatccaggcgcaaagcttgccggtgatc
ctcaaagggctggacctgattgcccaggccaagaccggcagcggcaagaccgcagccttc
ggcatcggcctgctgaacccgatcaacccgcgctacttcggctgccaggcactggtcatg
tgcccgacccgcgagctggctgaccaggtggccaaggaaatccgtcgcctggcccgcgcc
gaagacaacatcaaggtgctgaccctgtgcggcggcgtgtccctcggcccgcagatcgct
tccctggagcacggcgcccacgtcatcgttggcaccccgggccgcatccagcagcacctg
cgcaagggttcgctggttttggacggcttgaacacgctgatcctcgatgaagccgaccgc
atgctcgacatgggcttctacgacgccatcgaagacatcatcagcaagaccccggcccgc
cgccagaccctgctgttctcggccacctacccggtgagcatcaagcagctggcctcgaaa
ttcatgcgcgcgccgcaacaggtcaaggccgaagcgttccactcggacgatcagatcgag
cagcgcttctacgagatttctccggaagagcgcatggacgcggtgaccaaggtcctggcg
catttccgcccggcgtcttgcgtagccttctgcttcaccaagcagcaagtgcaggaaacc
gtggatcacctgaccgccaagggcatctccgccgttggcctgcatggcgacctggaacag
cgcgaccgtgaccaggtactggcgatgttcgccaaccgcagtacgtcggtactggtcgcc
accgacgtggctgcccgtggcctggacattgatgcactggacatggtgatcaacgtcgaa
ctggcccgcgactcggaaatccacatccaccgcgtgggccgtaccggtcgcgcgggtgag
actggcatcgctatcagcctggttgccccgtctgaagcccaccgcgcccaggccatcgag
cagttgcagaagtcgccgctgaactgggaccaactggacaacctcaagccgcaaagcggc
ggcccgttgctgccggtgatgagcaccctgtgcattgccgccggccgtaaagacaaggtt
cgcccgggcgacatccttggcgcactgaccggtgaagccgggattccgggggcccaggtc
ggcaagatcgcgatctttgatttccaggcgttcgtggccgttgaacgcgggatcgccaag
caggcgctgcagcgtttgaatgacggcaagatcaaaggccgttcgttgcgcgtgcgtatc
ctgtaa
DBGET
integrated database retrieval system
