Pseudomonas sp. NC02: C0058_31505
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Entry
C0058_31505 CDS
T10251
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc00300
Lysine biosynthesis
psnc00470
D-Amino acid metabolism
psnc01100
Metabolic pathways
psnc01110
Biosynthesis of secondary metabolites
psnc01120
Microbial metabolism in diverse environments
psnc01230
Biosynthesis of amino acids
Module
psnc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C0058_31505 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C0058_31505 (lysA)
Enzymes [BR:
psnc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C0058_31505 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AUO26282
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Position
6667930..6669177
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AA seq
415 aa
AA seq
DB search
MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSFADALEGTPSLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKSREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTSLPPFLDALDRLLALVDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLVSDYIKAVRERLEGRDLTLMFEPGRYIVANAGLLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMNVTAVKPRAGEGRSYDIVGPICETGDFLAKERQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggtgtcgcgctgtccgcc
atcgccgagcgctttggtaccccgacctacgtgtactcccgtgcccacatcgaagcgcaa
taccgctcctttgccgatgcgctggaaggcacgccgagcctggtgtgcttcgccgtaaaa
gccaactccaacctgggtgtactcaatgtcctggcgcgcctgggcgccggtttcgacatc
gtgtcccggggcgagcttgagcgtgtactggccgccggcggcaaggctgacaaaattgtg
ttctccggtgtcggcaagagccgcgaagacatgcgccgcgccctcgaagttggcgtgcac
tgcttcaacgtcgaatccaccgacgagctggagcgcctgcaagtggtggccgccgagatg
ggcgttcgcgcgccgatctccctgcgggtcaacccggacgtcgacgccggcactcacccg
tacatttccaccggtctcaaagagaacaagttcggcatcgccattgccgacgccgaggac
gtgtacatccgcgccgcgcagttgccgaacctggaagtcttgggtgtcgactgccatatc
ggctcgcaactgaccagcctgccaccgttcctcgacgccctcgaccgcctgctggcgctg
gtcgaccgcctcggcgagtgcggcatctacctgcaccacatcgacctcggtggcggcgtg
ggtgtgcgttatcgcgatgaagagccgccgctggtgtccgactacatcaaggccgtgcgc
gagcgcctcgaaggccgcgacctgacgctgatgttcgagccgggccgctacatcgtcgcc
aacgccggcctgctgctgacccaggtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgtccggcgctgtaccaggcctggatg
aatgtgacggccgtcaagccacgcgcaggcgaaggccgcagctacgatatcgtcggcccg
atctgcgagaccggcgacttcctggccaaggaacgtcagctggccctggaagaaggcgac
ctgctggccgtgcattcggccggtgcctatgggtttgtcatgagctccaactacaacacc
cgcgggcgtaccgccgaggtgctggtggacggtgatcaagcgtttgaagtgcgtcgccgc
gagacggtagccgagttgtttgctggcgaaagcctgctgccggagtaa
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