Pseudomonas sp. NC02: C0058_31735
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Entry
C0058_31735 CDS
T10251
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C0058_31735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psnc03400
]
C0058_31735
Enzymes [BR:
psnc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
C0058_31735
DNA repair and recombination proteins [BR:
psnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C0058_31735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
AUO26326
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All DBs
Position
6715191..6715970
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AA seq
259 aa
AA seq
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MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtcaatggtattcaggctgcagtcgagcgtggtttgctc
agttggctgcaagcccagaatgccgacgtcatctgcctgcaggacacccgcgcctccgcc
tttgaactggacgacccagccttccaactggatggctacttcctttatgcctgtgatgcc
gaagttcccgcccaaggcggcgtggctttgtattcgcggttgcaacccaaggcggtcatc
agcggcctcggcttcgagacagccgaccgctacgggcgctacctgcaagccgatttcgat
aaggtcagcattgcgaccttgctgcttccatcagggcagaatggcgatgaagacttgaac
cagaagttcaagctaatggacgacttcgcccgttatctggataaacagcggcgcaaacgt
cgcgagtacatttactgtggctcgctgtacgtggcgcaacagaagctggatatcaagaac
tggcgcgacagccagcaatccccgggcttcctggcgccggaacgggcctggatggacgag
attgtcggcaacatgggctatgtcgatgccctgcgggaagtcagccgcgaaggcgaccag
tacagctggtggccggataacgaacaggccgagatgctcaacctcggctggcgttttgac
taccagctgctgacgccaggcttgcgtcgcttcgtgcgcagcgcacgtctgccacgccag
ccgcgcttctcgcagcacgcgccgctgatcgtggactacgactggaccttgaccatctaa
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