Pseudomonas sp. NC02: C0058_31930
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Entry
C0058_31930 CDS
T10251
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc02025
Biofilm formation - Pseudomonas aeruginosa
psnc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
C0058_31930 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
C0058_31930 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psnc02044
]
C0058_31930 (clpV)
Secretion system [BR:
psnc02044
]
Type VI secretion system
Imp/Vas secretion system core components
C0058_31930 (clpV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Clp_N
NBD_SMAX1
AAA_25
Zeta_toxin
Sigma54_activat
TniB
nSTAND3
AAA_7
ATPase_2
AAA_14
NACHT
AAA_18
Torsin
Hpr_kinase_C
CbiA
SRP54
Motif
Other DBs
NCBI-ProteinID:
AUO26363
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Position
6757610..6760267
Genome browser
AA seq
885 aa
AA seq
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MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSGEFDKIKAEALSERFDEYVGDSPENALSASDGFNAGAVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQTNSEAL
LSAERERLATLESRWAEEKTLVDELLATRATLREKSGVVDSGDDQLRAQLVDLQQRLSTL
QGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHALQMI
AKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEA
HTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVME
DGEGRVIDFKNTLILLTTNAGTELISRVCKDPANIPEPEEIAKALRQPLLEIFPPALLGR
LVTIPYYPLSDEMLKAITRLQLNRIKKRVENTHKVAFDYDDDVVDLIVSRCTETESGGRM
IDTILTNSLLPDMSREFLTRMLEGKALAGVRISTRDNELHYDFND
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgccgcactgttcggcaaactcaacagtgtggcctacaaggcc
atcgaagccgccaccgtgttctgcaagctgcggggcaacccgtacgtggaactggcccac
tggtttcaccagttgctgcaactgcaggactctgacctgcaccgcatcattcgacagttc
aatgtcgagccggcgcgtctggcccgcgacctgaccgaagccctggaccgcctgccccgt
ggctcgacgtcgatcactgacttgtcgtcccatgtagaagaagcggtcgagcgtggctgg
gtctacggcagcctgatgtttggcgaaagccaggtgcgcaccggttacctggtgctggga
attctcaagacgccgagcctgcgccatgcgctgttgggcttgtccggtgagttcgacaag
atcaaggccgaagccctgagcgaacgctttgatgaatacgtcggcgactcgcccgaaaat
gcactgagtgccagcgacggtttcaacgccggtgctgtaccgggcgaggccagcggcgcc
atggccccgagcgcaatgggcaagcaggaagccctcaagcgcttcaccgtcgacctgacc
gaacaggcccgcagcggcaagctcgacccgatcgtcgggcgtgacgaagagatccgccaa
ctggtggacatcctcatgcgtcgccgccagaacaacccgatccttaccggtgaagccggc
gtcggcaagaccgccgtggtcgaaggcttcgccctgcgcatcgtcgccggcgacgtacca
cccgcgctgaaagatgtggaactgcgcagcctcgatgtcggcctgctgcaagccggcgcg
agcatgaaaggcgagttcgaacaacgcctgcgccaggtcatcgaagacgtccaggcttcg
ccgaaaccgatcatcctgtttatcgacgaagcccacaccctggtaggtgccggtggcgcc
gccgggaccggtgacgcggccaacctgctcaagcctgccctggcccgtggcaccttgcgt
accgtggccgccaccacctgggccgagtacaagaagcacatcgaaaaagacccggccctg
acccgccgtttccaggtggtgcaagtggccgagccgtcggaagacaaggcgttgctgatg
atgcgcggcgtggcttcgaccatggaaaaacaccatcaggtgcagatcctcgacgaagcg
ctggaagcgtcagtgaagctgtcccaccgctacattccggcgcgtcaattgccggacaaa
tccgtgagcctgctggacaccgcctgcgcccgcgtcgccatcagcctgcacgcggtgccg
gcagaagtcgacgacagccgccgccgtatcgaggcactggaaaccgagctgcaaatcatc
gcccgcgagcacgcgatcggcatcgccatcggtgcgcgccagaccaacagcgaagcgctg
ctgagcgccgaacgcgagcgcctggccaccctggaaagccgttgggccgaagagaaaacc
ctggtggatgagttgctcgccacccgtgcgacgttgcgcgaaaaatccggtgtcgtggac
agcggcgatgaccaattgcgtgcccaattggtagacctgcaacaacgccttagcaccctg
caaggtgaaactccgctgatcctgccgaccgtggattaccaggccgtggcctcggtggtc
gccgactggaccggcatcccggtgggccgcatggcccgcaacgaactggagacggtgctc
aacctcgaccagcacctgaagaaacgcatcatcggccaggaccacgccttgcagatgatc
gccaagcgcatccagacctcccgcgccggcctcgacaacccgagcaagccgattggcgtg
ttcatgctcgccggcacctccggcgtgggcaagaccgaaaccgccctggccctggccgaa
gccatgtacggcggtgagcagaacgtgatcaccatcaacatgagcgagttccaggaagcc
cacaccgtgtccaccctcaagggtgcgccaccgggctacattggctatggcgaaggtggc
gtgctgaccgaagccgtgcggcgcaaaccctacagcgtggtgctgctggacgaggtggaa
aaagcccacccggacgtgcatgaaatcttcttccaggtgttcgacaaaggcgtgatggaa
gacggcgaaggccgggtgatcgacttcaagaacaccttgatcctgctgaccaccaacgcc
ggtaccgagttgatttcccgggtctgcaaagacccggcgaacatccccgagcccgaggaa
atcgccaaggccctgcgccagccgctgctggagattttcccgccggcgctgctcggccgc
ctggtgaccattccgtactacccgctgagcgacgagatgctcaaggcaatcacccgcctg
caactcaaccgcatcaagaagcgtgtggagaacacccacaaagtcgccttcgattacgac
gacgacgtggtcgacctgatcgtgtcccgctgcaccgaaaccgaaagcggcgggcggatg
atcgacaccatcctcaccaacagcctgctgccggacatgagccgcgaattcctcacccgc
atgctcgaaggcaaggcgctggcgggggtgcggatcagcacgcgggataacgaattgcac
tacgacttcaacgattga
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