Pseudomonas sp. NC02: C0058_32185
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Entry
C0058_32185 CDS
T10251
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psnc Pseudomonas sp. NC02
Pathway
psnc03420
Nucleotide excision repair
psnc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C0058_32185
03430 Mismatch repair
C0058_32185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psnc03400
]
C0058_32185
Enzymes [BR:
psnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0058_32185
DNA repair and recombination proteins [BR:
psnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C0058_32185
MMR (mismatch excision repair)
Other MMR factors
C0058_32185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUO26412
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All DBs
Position
6816816..6818999
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPVRQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
VACQRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSDDFPDAETIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHSDVSMWEAMRLLIANKGLTGRAAGALSVFVELIENLAAKCMEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEDLTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSSMFAGSEIPETPFSLGQQVKHAIFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttttgctgaactccctcaacgatgcccaacgccaggccgta
gcggcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcctcaccgcattccatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgtcatcgcatcgagcagttgatg
ggcatcagcccggccggcatgtgggtgggcaccttccacggcctggcgcaccgcctgttg
cgggcgcattggcaggaagccggcctgagccagaccttccagattctcgacagcgacgac
cagcaacgcctggtcaagcgggtgatccgcgagctgggcctggatgaacaacgctggccg
gtccgtcaggcccagtggttcatcaatggccagaaagatgaaggcctgcgcccgcaacat
atccaggccagcggcgacctgttcctggccaccatgcgcagcatttatgaagcctatgaa
gtggcctgccagcgcgctggcgtcatcgacttctccgaactgctgctgcgcgccctcgac
ttgtggcgcgacaacccgggcttgctggcgcactaccagaaacgcttccgccacatcctg
gtggacgagttccaggataccaacgccgtgcagtacgcctggttgcgcctgctggccaag
ggcggcgacagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgagaacatctaccagtacagcgacgacttcccggacgccgaaaccatccgc
ctggaacagaactaccgctccaccgccgggatcctcaaggccgccaacgccttgatcgcc
aacaacaccgggcgcctgggcaaagagctgtggaccgacggcggcgaaggcgaagcgatc
aacctgtacgccgccttcaacgaacacgatgaagcgcgctacgtggtggaaaccatcgaa
agcgccctgaaaaccggcctggcccgcagcgatatcgcgattctctaccgctccaacgcc
caatcacgggtattggaagaggccctgctgcgcgagcgcattccgtatcgcatctatggt
ggccagcgcttcttcgaacgtgccgaaatcaagaacgccatggcctacctgcgcttgctg
gaaggtcgcggcaacgatgcggcgctggaacgggtgatcaacattccggcccgcggcatc
ggcgagaagaccgtcgaggcgattcgcgaccacgcacgccacagcgatgtgtcgatgtgg
gaagcgatgcgcctgctgatcgccaacaagggcctgaccggccgtgcggccggtgccttg
agcgtgtttgtcgagctgatcgagaacctggccgccaagtgcatggaaatgcccctgcac
ctgatgacccagaccgtgatcgagcagtccggcctgatcgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcccgcgcg
ttcgaaaacaccgaagaagacgaagacctgacgccacttgcggcattcctcggccacgct
tccctggaagccggcgacacccaggctgatgagcatgaagacagcattcagctgatgacc
ttgcacagtgccaagggcctggaattcccctacgtgttcctggtgggcatggaagaaggc
ctgttcccccacaagatgagcctggaagaacccggccgccttgaggaggaacgccgcctg
gcctacgtgggcatcacccgggccatgcagaacctggtgatgacctacgccgaaacccga
cgcctgtacggcagcgagacctacaacaaggtgtcgcgcttcgtacgcgaggtgccgaaa
gggctgattcaggaagtgcgcttgtccaacagcgtcagccgaccgttcggcggcggccag
cagcagaactccagcagcatgttcgctggttcggaaatccccgagacgccgttcagcctt
ggccaacaggtcaagcacgcgatcttcggcgaaggcgtgatcctcaacttcgaaggcgcc
ggtgcccaggccagggtgcaggtgaacttcgccgaaggcagcaagtggctgatgatgggc
tacgccaagctcgaagcaatctga
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