Pseudomonas sp. NBB: NY023_03350
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Entry
NY023_03350 CDS
T11765
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
psnd Pseudomonas sp. NBB
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
HTH_28
HTH_50
HTH_29
HTH_7
HTH_23
AAA_3
AAA_16
HTH_30
HTH_20
AAA_2
FleQ
Motif
Other DBs
NCBI-ProteinID:
WOB59524
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Position
complement(742086..743435)
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AA seq
449 aa
AA seq
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MARILIVDDDAAFRDSLAEMLQDLGYTVLQAETTDAGLHRLRTEDVDAAIVDLRLPGEDG
LVFLRRAARISQVPCIMLTAYASGGNTIEAMSLGAFDHLTKPVTRAALIETLERALRRAA
KTPDNPQAAGASPAAKEPVDGTELVSSSEAMRQVFKRIGLAANSDATALILGETGTGKEL
VARALHRNSGRATGPFVAVNCAAIPAELMESELFGHVKGAFTGAITERTGRFREADGGTL
FLDEIGDMPLSTQAKILRVLQEREITPVGANRAQPVNVRIIVATHRDLPSAVKEGRFRED
LWYRLQVVPLWLPPLRERLGDVLLLAEHFLRLLGGDSPKRLSAAAARLLLAHSWPGNVRE
LRNAMERAAILSHGPVIEAEHIGLQTAAAPTPGLDIDWEGPMAQAVAQLEREMIVRALAA
TAGNRAEAARRLGLSRQQLYRKLAEFDLD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgaatcctgatcgtcgacgatgacgccgcattccgcgacagccttgcagaaatg
ctgcaagacctggggtatacggtgctgcaggctgaaaccaccgatgcaggcctgcacagg
ctgcgcaccgaggacgtggatgcggccatcgtcgatctgcggctgccgggcgaggatggc
ctggtgttcctgcgccgcgcggcgcgcatctcgcaggtgccttgcatcatgctcaccgcc
tatgcgagtggcggcaacaccatcgaggcgatgagcctgggcgcgttcgaccacctgacc
aagcccgtgaccagggccgccctgatcgagacgctcgaacgggccctgcgacgggcagcc
aaaaccccagacaacccccaggcggccggggcatcacctgccgcaaaagagcccgtggat
ggcaccgaactggtaagcagcagcgaggccatgcgccaggtcttcaagcgtatcgggctg
gccgcgaactccgatgccactgcgttgatcctgggcgagacgggcacaggcaaggaactg
gtcgcgcgtgccttgcatcgcaacagcgggcgagccaccggccccttcgtcgccgtcaac
tgcgcggcgatcccggccgaactgatggaaagcgagctgttcggtcatgtcaaaggcgcg
ttcaccggtgccatcactgaacgcaccgggcgctttcgcgaggccgatggcggcaccctg
ttcctcgacgaaataggcgatatgccgttgtccacgcaggcgaagattctgcgggtgctg
caggaacgcgaaatcaccccagtgggcgccaatcgtgcccagccggtgaacgtgcgcatc
atcgtggccacccaccgagacctgcccagcgcagtcaaggaagggcgcttccgggaagac
ctgtggtaccgcctgcaggtagtacccctgtggctaccgccgctgcgtgagcgcctgggc
gacgtgctgctgctggccgaacactttctacgcctgctgggcggcgactcgcccaagcgg
ttgagcgcggcggcagcccggctgctgctggcccattcctggccgggcaacgtgcgcgaa
ctgcgcaatgccatggagcgcgcggccatcctcagccacggcccggtcatcgaggccgaa
cacatcgggttgcagacggcggcggcgcccaccccgggcctggacattgactgggaaggc
ccaatggcacaggccgttgcccagctggagcgcgaaatgatcgtgcgcgccctggctgcg
acggcgggcaaccgcgcagaggcggcgcggcgcctcggtctgtcccgccagcagctctac
cgcaagctggccgagttcgatctggactaa
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