Pseudomonas sp. NBB: NY023_05895
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Entry
NY023_05895 CDS
T11765
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
psnd Pseudomonas sp. NBB
Pathway
psnd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psnd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NY023_05895 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psnd01007
]
NY023_05895 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psnd03016
]
NY023_05895 (lysS)
Enzymes [BR:
psnd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NY023_05895 (lysS)
Amino acid related enzymes [BR:
psnd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NY023_05895 (lysS)
Transfer RNA biogenesis [BR:
psnd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NY023_05895 (lysS)
Prokaryotic type
Other AARSs
NY023_05895 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AsnA
Motif
Other DBs
NCBI-ProteinID:
WOB59995
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All DBs
Position
1278853..1280355
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AA seq
500 aa
AA seq
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MSDLKTEAQDLQQEENALIALRKEKLAAERAKGNAFPNDFRRDSYCNDLQKQYADKTKEE
LEAAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLPEETLAAVKTWDLGDIISAE
GTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFR
VRSQVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLV
LGTTDVPYGDKVFHFGEPFARLSVFDSILKYNPELTAADLQDVDRARDIAKKAGAKVLGH
EGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRNDDNPAVTDRFELFIGGREIAN
AYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcaagaccgaagcgcaagacctgcaacaggaagaaaacgccctgatcgcc
ctgcgcaaggaaaagcttgccgccgagcgcgccaagggcaatgccttccccaatgacttc
cgtcgcgacagctactgcaacgacctgcagaagcagtatgcggacaagaccaaggaagaa
ctggaagctgcagcgattccggtcaaggttgccggccgcatcatgctcaaccgcggctcg
ttcatggtcattcaggacatgaccggccgtatccaggtctacgtcaaccgcaagaccctg
ccggaagaaaccctggccgcggtcaagacctgggacctgggcgacatcatcagcgccgaa
ggtaccctggcccgttccggcaagggcgacctgtacgtcgaaatgaccaacgtgcgcctg
ctgaccaagtcgctgcgcccgctgcccgacaagcaccacggcctgaccgacaccgagcag
cgctaccgccagcgttacgtcgacctgatggtcaatgaagaaacccgccacaccttccgt
gtgcgttcgcaggtgatctcgcacatccgcaagttcctcatcgagcgcgacttcctcgaa
gtcgagacgccgatgctgcaaaccatcccgggcggtgccgcggccaagccgttcgaaacc
caccacaacgccctggacatggccatgttcctgcgcatcgcgccggagctgtacctcaag
cgcctggtggttggtggcttcgagaaggtgttcgagatcaaccgcaacttccgtaacgaa
ggcgtttcgactcgtcacaaccctgaattcaccatgctcgagttctaccaggcctacgcc
gactatcgcgacaacatggacctcaccgaggaactgttccgcgagctggcgcagctggta
ctgggcactaccgacgtgccgtatggcgacaaggtgttccacttcggcgagccgttcgcc
cgcctgtcggtattcgactcgatcctcaagtacaacccggagctgaccgctgccgacctg
caggacgtcgaccgcgcccgcgacatcgccaaaaaggccggtgccaaggtgctgggccac
gaaggcctgggcaagctgcaggtgatgattttcgaagagctggtcgagcacaagctggag
cagccgcacttcatcaccgagtacccgttcgaagtatcgccgctggcccgtcgcaacgac
gacaacccggctgttaccgaccgtttcgagctgttcatcggtggccgcgagatcgccaac
gcctactccgagctcaacgatgccgaagaccaggccgagcgcttcctggcccaggtggcc
gagaaggacgccggtgacgacgaagccatgcactacgacgccgacttcgttcgcgcactg
gagtacggcatgccgccgactgcaggtgaaggtatcggtatcgaccgcctggtgatgctg
ctgaccaactcgccgtcgatccgcgacgtgatcctgttcccgcacatgcgtccgcaggcc
tga
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