Pseudomonas sp. NBB: NY023_08410
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Entry
NY023_08410 CDS
T11765
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psnd Pseudomonas sp. NBB
Brite
KEGG Orthology (KO) [BR:
psnd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psnd03400
]
NY023_08410
DNA repair and recombination proteins [BR:
psnd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NY023_08410
Archaeal homologous recombinant proteins
NY023_08410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
AAA_15
ABC_tran
nSTAND3
RsgA_GTPase
cobW
AAA_22
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WOB60457
LinkDB
All DBs
Position
complement(1790674..1794318)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPVDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LNDIGREAKVPDADGEIPTSDPRNLLRRGTGSGFAEVDFVGIDGRRYRARWEANRARDKA
NGKLQHSRQSFYDLDSEQVLGSGKNEYKQLVEARLGLNFEQFTRAVMLAQSEFGAFLKAD
DKERSELLEKLTNTAIYTRLGQRAFSKAREAGEAHNALKDRASHLLPMAAEARAELDQRL
EQAQQQFKADQAGERQLEQQRNWLNEQRQLQAQHAEAGTALQAAEQDWQQLADQRLDLVR
LERLAPQRHQFHRQQTLTAQLAPVAAKIAEQQQQQAELQVRTSELEQALDAARQALADSQ
AQHSENAPRLRQAFAAQDNLARLDQELAAQRSAGQQAEQQVAEGQQHLQQLEDNQQRSLQ
QLAQIDTALADSQHLAGLANAWHAYLPQLKQVMLIGGRLAKGREELPGLQAQASQANAHL
QAERDAFELLFREAKAEPQALAEQIDLLGGMLQDNRKQQRAVEELSRLHGRELELRQQLE
AVRVRQQQAMQQRQQLITEGTAAKAELEAAEQALNLTRQLLERQRLARNTSVEELRGQLR
DGEPCPVCGSAEHPFHQPDALLQSLGRHDQAEEDAAQKQVETLNSKLVELRTQLGVVNAQ
LKDYQQQQQQLGEQLQPLVAQVQAHSLWPALAPQDDNARSAWLDSQLRRLDEEIGQDEKR
QSALLALQKDAARLNQQLQAAQQAQQQAQRHLEQQHQALASDEQQLQQGLEDLAGVLPEE
ALKALNDDPANAFLALDQQIALRLQQLEQRKDEQEEQQARQAQLDKLRDQQQARVQTQQQ
LQQKLAALDEQRQQAQASLGELLGGHASAEAWQLHMDAALEQARALDADTAQRLQDLRTQ
GVQLASELKANTQQQQALDAECQQLQGQIAQWRAEHPELDDAGLDRLLGMEDAQVNELRQ
RLQGAEKAIEQGRVLLQEREQRLQQHAAQMTVDTSADALEQALTELRERLAGHEQQCAEL
RAQQADDQHRQQAHQALAAEIEQAHQQWQRWARLNALIGSASGDVFRKIAQGYNLDLLLH
HANAQLRQLARRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSDVEVCG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccatccgcctgaagaacctggcatccctggccggcccggtcgatatc
gatttcaccgccgaaccgctggccagcgccggcctgttcgccatcaccgggcctaccggg
gcgggcaaaagtaccctcctcgacgccctgtgcctggcgttgttcggcaccgtgccacgg
ctgaacgacattggccgcgaggccaaggtgccggatgcagacggtgaaatccctacctcc
gacccgcgcaacctgctgcgccgcggcaccggcagcggctttgccgaagtcgatttcgtc
ggcatcgatggccgccgctatcgcgcccgctgggaagccaaccgcgcccgcgacaaggcc
aacggcaagctgcagcacagccgccagagcttctatgacctggacagcgagcaggtactg
ggcagtggcaagaacgagtacaaacaactggtcgaagcccgcctgggcctgaacttcgaa
cagttcacccgcgcggtgatgctggcccagagcgaattcggcgccttcctcaaggccgac
gacaaagaacgcagcgagctgctggaaaagctcaccaacaccgccatctacacccgcctg
ggccagcgcgccttcagcaaggcacgcgaagccggcgaggcccacaatgccctgaaggac
cgtgccagccacctgctgccgatggccgccgaagcgcgcgccgaactcgaccagcgcctg
gagcaggcgcaacagcagttcaaggccgaccaggctggcgagcgccagctggaacagcaa
cgcaactggctgaacgagcagcgccagttgcaggcccagcacgccgaagccggcaccgcg
ctgcaggccgccgaacaggactggcaacaactggctgaccagcgcctggacctggtgcgc
ctggagcgtctggccccgcagcgtcaccagttccaccgccagcagacactgaccgcgcaa
ctggcaccggtggcagcgaagatcgccgagcaacagcagcagcaagccgaactgcaagtg
cgcaccagtgagctcgaacaggcgctggacgccgcgcgtcaggcgcttgccgatagccag
gcccaacacagcgagaacgcccctcgcctgcgccaggcctttgccgcccaggacaacctg
gcccgcctggaccaggagctggcagcacagcgcagcgccggccagcaggccgagcagcag
gtcgccgaaggccagcagcacctgcagcagctcgaagacaaccagcagcgcagcctgcag
caactggcgcagatcgacaccgcgctcgccgacagccagcatctggcgggcctggccaat
gcctggcacgcctacctgccgcaactgaagcaagtgatgctgatcggtggccgcctggcc
aagggccgtgaagagctgcccggcctacaagcccaggccagccaggccaatgcgcacttg
caggccgagcgcgatgccttcgagctgctgttccgcgaagccaaggccgaaccccaggcc
ctggcagaacagatcgacctgctgggtggcatgctgcaggacaaccgcaagcagcagcgc
gccgtggaagagctgtcacgtctgcatggccgtgaactggagctgcgccaacagctggag
gccgtacgcgtgcgtcagcagcaggccatgcagcagcgccagcaactgattaccgaaggc
accgccgccaaggccgagctggaagccgccgagcaagcgctcaacctcacccgccagttg
ctggaacgccagcgcctggcacgtaacaccagcgtcgaagagttgcgcggccagttgcgc
gacggcgaaccctgcccggtgtgcggcagcgccgagcacccgttccaccagcctgacgcg
ctgctgcaaagcctgggtcgccatgaccaggccgaggaagacgccgcgcagaagcaggtc
gaaaccctcaacagcaagctggtggagctgcgcacccagctgggcgtggtcaacgcccag
ctcaaggattatcagcagcaacagcagcaactgggcgaacagctacaaccgctggtggcc
caggtgcaggcgcacagcctgtggcccgccctggccccgcaggacgacaatgcccgcagt
gcctggctcgacagccagctgcggcgcctggacgaagaaatcggccaggacgagaaacgc
cagagcgccctgctcgccctgcaaaaagatgcagcccgtctcaaccagcaattgcaggcc
gcccagcaggcgcaacagcaagcccagcgccacctggagcaacagcaccaggccctggcc
agcgacgagcagcagttgcagcaaggccttgaggaccttgccggcgtattgcccgaagag
gccctcaaggccttgaacgacgacccggccaatgccttcctcgccctggaccagcagatc
gccctgcgcctgcagcaactggagcagcgcaaggacgaacaggaagaacagcaagcccgc
caggcccagctggacaagctgcgcgaccagcagcaggcacgcgtgcagacccagcagcag
ctgcagcagaaacttgccgccctcgacgagcagcgccagcaggcccaggcttcgctcggc
gaactgctgggcggacacgccagcgccgaagcctggcaactgcatatggacgccgcgctg
gagcaggcccgcgccctcgatgccgacactgcccagcgcctgcaggacttgcgtacccaa
ggcgtgcaactggccagcgaactcaaggccaacacccagcagcagcaggcgctggacgcc
gagtgccagcagttgcagggccagatcgcccagtggcgcgcagaacacccggaactggac
gacgccggcctggatcgcctgctgggcatggaggacgcgcaggtaaatgagctgcgccag
cgcctgcaaggcgccgaaaaggccatcgaacagggacgcgtgctgctgcaggaacgtgaa
caacgcctgcagcaacatgccgcgcaaatgactgtggacacctcggccgacgccttggaa
caggccctgaccgaactgcgcgaacgcctggccggccatgagcagcaatgcgccgaactg
cgtgcacagcaggccgatgaccagcatcgccaacaggcgcaccaggcgctggcggcggaa
atcgaacaggcccaccagcagtggcaacgctgggctcgcctgaacgccctgatcggctcg
gcctctggcgatgtgttccgcaagatcgcccagggctacaacctcgacctgctgctgcac
cacgccaacgcccagctgcgccagctggcccgccgttaccgcctaaagcgcggcggcagc
gccctgggcctgctggtgctggacaccgagatgggtgacgaactgcgttcggtgcactcg
ctgtctggcggggaaaccttcctggtgtcgctggccctggccctgggcctggcctcgatg
gcctccagcacgctgcgcatcgaatcgctgttcatcgatgaaggcttcggcagcctcgac
cccgagtcgctgcaactggccatggacgcccttgacggcttgcaggcccagggccgcaag
gtggcggtgatttcccacgtgcaggaaatgcacgaacgcatcccggtgcagatccaggtg
cgccgccaaggcaatggcctgagtgacgtggaggtgtgcgggtga
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integrated database retrieval system
