Pseudomonas sp. NBB: NY023_15805
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Entry
NY023_15805 CDS
T11765
Name
(GenBank) translocation/assembly module TamB
KO
K09800
translocation and assembly module TamB
Organism
psnd Pseudomonas sp. NBB
Brite
KEGG Orthology (KO) [BR:
psnd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psnd02000
]
NY023_15805
Transporters [BR:
psnd02000
]
Other transporters
Pores ion channels [TC:
1
]
NY023_15805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TamB_N
TamB
DUF3237
Motif
Other DBs
NCBI-ProteinID:
WOB56699
LinkDB
All DBs
Position
complement(3378255..3381929)
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AA seq
1224 aa
AA seq
DB search
MKRVIKYTLAGLLGVTASLGLVLGLLLGTEAGSRWVLGKVPGLEVADFQGRLAGSWQASR
LIWADAGSSVDLQAPLLAWSPACLLRSTLCIDQLQAQRIDMAFAPSAESADSGPLQLPAL
RLPLAIELGEVKVGQLRLDGNDLLGDLQLAAHWTNAGLRIDSLQLKRDDLQLSLQGDLQP
EADWPVELQAQLQLPTVGGKPWQLALTATGELQKTLKLAGTSSGYLDATLNGQLQALAEH
LPATLQIRSEAFKPAASLPDTVQFNQLKLDARGDLLKGYQLSGSASLPAEQSPIALLLSG
LVDSKGARLDALDLSASDTQRVKMQATADWQQGLVADAQLDWQDFPWLRLYPLETPPEVT
LKRLMAQVHYRDGNYQGTFNGDLDGPAGAFSLASPFEGDLSQVKLPQLALTAGQGKAAGS
VAVRFADTLAWDVDLQLSALDPAYWLAELPGNLAGPLRSKGEMKGDALSLDAQLDLKGRL
RGQPAVLKVEAQGAGQSWTLGTLAVQLGDNRINGSGSLQQRLAGRLDLDLPRLGQLWPRL
QGQVKGRLDVAGTLQAPQGTLALQGQRLAQAENRVQQLDLDARLDNAQRGVIELKASGIH
LGDTALGTLQANGKGDIRQQALTLALDGPQLKLDLGLDGQLNKGDWRGRLASGRIQAGGQ
DWQLQAPARLQRLASGQLDFAAHCWRSGQASLCGDDQRLAPEPRLRYHLKQFPLDSLAQW
LPKDFAWQGLLNADINLDMPASGPKGNIVVDASGGTLRVRDKDRWVDFPYQALRLDSTLA
PRRIDTRLAFRGERLGELNVNTRLDPLGNNKPLSGDFRLAGLDLSVARPFVPMVERLAGQ
LNGSGRLSGTLLAPQVNGNLMLSGGEVSGAELPVSLEDLSLQALIAGEQVQLNGGWRSGE
AGRGQLNGNLTWGQALGMDLRLQGQQLPVTVEPYATLEVAPDLTLRLIDDKLAVTGKVQV
PKGAITVRELPPSTVKVSDDTVIVGHQTEEGKPPMAMAMDIDVEVGRDKLSFSGFGLTAN
LLGHVHIGDNLDTRGELNLADGRYRAYGQRLTIRSARLLFAGPIDQPYLDIEAIRKVDDV
IAGIRLSGSAEQPTSKVFSEPAMSQEQALSYLVLGRPLGTSGEDNNMLAEAALGLGLAGS
AGITGSLASSLGIDDFQLDTEGSGNTTSVVASGNLTEKLSLRYGVGVFEPANTIALRYKL
SKKVYLEAASGLASSLDIFYKRDF
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgcgtgatcaagtacactctggcgggcctgctgggggtaaccgcaagcctgggc
ctggtactcggcctgttgctggggaccgaagccggcagccgctgggtgctgggcaaggtg
cccgggcttgaggtggctgacttccagggccgcctggccggtagctggcaagccagccgg
cttatctgggccgatgccggcagctcggtagatttgcaggcaccgctgctggcctggtcg
ccggcatgcctgctgcgctctaccttgtgcattgaccagttgcaggcgcagcgtatcgac
atggcctttgcgcccagcgccgaatcggccgacagtggcccgctgcagttgccggccttg
cgcttgccgctggccatcgaactgggtgaggtcaaggttggccagttgcgcctggatggc
aatgatctgcttggcgacttgcaactggcggcgcactggaccaatgccgggctgcgcatc
gacagcctgcagctgaagcgtgacgacctgcaattgagcctgcagggcgacctgcagccc
gaagctgactggccggtagaactccaggcgcagctgcaactgccaacggtaggtggcaaa
ccctggcagctggcattgaccgccaccggcgagttgcagaaaaccctgaaactagccggc
accagcagcggttacctcgacgccacgctgaacgggcaattgcaggcgttggccgagcac
ctgccggcgaccttgcagatccgctccgaggcattcaagccggccgcctcgttgcccgac
accgtgcagttcaaccagctcaagctcgacgcccggggcgacctgctcaagggctatcaa
ctgtcggggtcggccagcctgccggccgagcagtcgccgatcgccttgctgttgtcaggg
ctggtcgacagcaaaggcgccaggcttgatgccctggacctgagcgccagcgatacccag
cgggtcaagatgcaagccacggctgactggcagcaaggcctggtcgccgacgcccagttg
gactggcaggactttccgtggctgcgcctgtacccgctggagacgccccctgaggtcacc
ctcaagcggctcatggcccaggtacattatcgcgatggcaactaccagggcactttcaat
ggcgacctggatggcccggctggcgcgttcagcctggccagccccttcgaaggcgacctg
agccaggtgaagctgccgcagttggcgctgaccgctgggcaaggcaaggctgccggcagt
gtcgccgtgcgctttgccgacaccttggcatgggatgtcgacctgcagttgtcggcgctc
gacccagcttattggctggccgagctgccgggtaacctggcgggtccgctgcgcagcaaa
ggggagatgaaaggcgacgccttgagcctcgatgcccagcttgacctgaaaggccgcctg
cgcggccaaccggcagtgctcaaggtcgaggcccagggggcagggcagagctggaccttg
ggtaccctggcagtccagctgggggataaccgcatcaatggcagtggcagcctgcagcaa
cgcctggccgggcggctcgacctcgacctgccgcgcctgggccagttgtggccaaggttg
cagggccaggtcaagggccggcttgacgtcgccggtaccttgcaggctccgcaaggtacg
ctggccctgcagggccagcggctggcccaggcggaaaaccgcgtgcagcagctggacctg
gacgcccgcctggacaacgcccagcgtggcgtgatcgaactgaaggccagcggcattcac
ctgggtgacacggcgttgggcaccttgcaggccaacggcaagggcgacattcgccagcaa
gctttgaccttggcgctggacggcccgcagctcaaactcgacctcggcctggatggccag
ttgaacaagggtgactggcgcgggcgcctggccagtgggcggatccaggccggcggccag
gactggcagttgcaggcaccggcgcgcctgcagcggctggccagcggccagctggacttt
gcggcgcactgctggcgctccggccaggccagcttgtgcggcgacgaccagcgtctggcc
cccgagccacgcttgcgctaccacctcaagcagttcccgctggacagcctggcccagtgg
ctgccgaaggacttcgcctggcagggtctgctcaatgccgacatcaatctggacatgccg
gccagcggccccaagggcaacatcgtcgtcgacgccagtggcggtaccctgcgcgtgcgc
gacaaggaccgctgggtcgacttcccgtaccaggccctgcgcctggacagcacgctggcg
ccaaggcgcatcgatacccgcctggcgttccgcggcgagcgcctgggcgagctgaacgtc
aacactcgcctggatccactgggcaacaacaaaccgctgtcgggtgattttcgcctggcc
ggcctcgacctgtcggtggcgcgcccgttcgtgcctatggtcgagcgcctggccgggcag
ctcaatggcagtggccggctgtcgggcaccttgttggcgccgcaggtcaacggcaacctg
atgctcagtggcggcgaagtcagtggtgccgagctgccggtcagtctcgaggacctgtca
ttgcaggcgttgattgccggggagcaggtacagctcaacggcggctggcgcagtggcgag
gcggggcgtggccagctcaatggcaacctgacctggggccaggcactgggcatggacctg
cgtctgcagggccagcaactgcccgtcacggtcgagccctatgcgacgctggaggtcgcc
ccggacctgaccttgcgcctgatcgacgacaagctggcggtgaccggcaaggtacaggtg
cccaagggtgcgatcactgtgcgcgagctgccaccgtccaccgtcaaggtctcggatgac
acggtgatcgtcggccaccagaccgaagagggcaaaccgcccatggctatggccatggac
atcgatgtcgaagtgggccgcgacaagctttcgttcagcggctttggtctcacggccaac
ctgctcggccatgtgcacatcggcgacaacctcgacacccgtggcgagctgaacctggcc
gatggacgctaccgcgcctacggccagcgcctgaccatccgcagtgcgcggttgttgttc
gcaggcccgatcgaccagccgtacctggacattgaagcgatccgcaaggtcgacgatgtg
attgccggtatccgcctgagcggcagtgccgagcagcccacaagcaaagtgttctcggaa
ccggccatgagccaggagcaggcgctgtcgtacctggtactggggcggccgctgggcacg
tccggcgaagacaacaacatgctcgccgaggcggccttgggcctgggcctggcgggtagc
gccggcatcaccggcagcctggcttcgagcctgggcatcgacgacttccagctggacacc
gaaggttcgggcaataccaccagcgtggtcgccagcggcaaccttaccgagaaactgagc
ctgcgctacggggtgggggtgttcgagcccgccaacaccattgcattgcgctacaagctg
agcaagaaggtgtacctcgaagctgccagcgggctggccagttcactggacatcttctac
aagcgcgacttctga
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