Pseudomonas sp. NBB: NY023_17135
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Entry
NY023_17135 CDS
T11765
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
psnd Pseudomonas sp. NBB
Pathway
psnd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psnd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NY023_17135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psnd02000
]
NY023_17135
Transporters [BR:
psnd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NY023_17135
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
RsgA_GTPase
AAA_29
MIT_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WOB56959
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Position
3673417..3674565
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AA seq
382 aa
AA seq
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MSAVIKDNAHGKTLVSLRGLNKHYGDFTAVDNLDLEIQDGEFLTFLGSSGSGKSTTLSML
AGFETPSSGEILVDGQSLVNVPPHKRDIGMVFQRYSLFPHLNVRDNIGFPLAIRKLSASE
TSKRVDAMLKLVQLEKFAHRKPSQMSGGQQQRVAIARALVYEPRILLMDEPLGALDKKLR
EDLQDELRQLHRRLGITIVYVTHDQEEAMRLSQRIAIFSHGKIVGLGTGYDLYQNPPNAF
VASFLGNSNFLRIKASSNGAGSFEGQPVAIRLTPGLAASQDALIMVRPEKALALTAEQAA
REPLPAGWNEVSAKVGEVLFLGESQTCHVVTAGGTELTVKALSAAGMPMQPGDTVKVRWA
VADACIYTEWAESDLSKSAGAH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtgatcaaagacaacgcgcacggcaagaccctggtcagcctgcgcggcctg
aacaagcactacggcgacttcaccgccgtggacaacctcgacctggaaatccaggacggc
gagttcctgaccttcctcggctccagcggctcgggcaagtccaccaccctgtcgatgctg
gccggtttcgaaacgccgagcagcggcgagatcctggtcgatggccagtcactggtcaac
gtgccgccgcacaagcgtgacatcggcatggtgttccagcgctattcgctgttcccgcac
ctgaacgtgcgcgacaacatcggctttccgctggccattcgcaagctcagtgccagcgaa
accagcaagcgcgtcgatgccatgctcaagctggtgcagctggaaaagttcgcccaccgc
aagccgtcgcagatgtccggtggccagcagcagcgcgtggctatcgcccgggcgctggtg
tacgaaccgcgcatcctgctgatggacgaaccgctcggcgcgctggacaagaagctgcgc
gaagacctgcaggatgaactgcgccagttgcaccggcgcctgggcatcaccatcgtctac
gtcacccacgaccaggaagaagccatgcgcctgtcccagcgcatcgccatcttcagccat
ggcaagatcgtcggcctgggcaccggttacgacctgtaccaaaacccgccgaatgccttc
gtcgcctcgttcctgggcaactccaacttcctgcggatcaaggccagcagcaatggcgcg
ggcagcttcgagggccagccggtagccatccgcctgaccccgggcctggccgcctcgcag
gatgcactgatcatggtacgcccggaaaaggccctggccctgaccgccgaacaggccgca
cgcgagccgctgccggcggggtggaacgaggtcagtgccaaggttggtgaagtgctgttc
ctgggcgagagccagacctgccacgtagtgaccgcgggcggaaccgagctgacggtcaag
gctttgtcggcggcgggcatgccgatgcagccaggggataccgtgaaggtgcgctgggcg
gtggcggatgcgtgcatctataccgagtgggcggaaagtgacctgagcaagtctgccggg
gcgcattga
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