Pseudomonas sp. NBB: NY023_17945
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Entry
NY023_17945 CDS
T11765
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
psnd Pseudomonas sp. NBB
Pathway
psnd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psnd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NY023_17945 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psnd01007
]
NY023_17945 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psnd03016
]
NY023_17945 (serS)
Enzymes [BR:
psnd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
NY023_17945 (serS)
Amino acid related enzymes [BR:
psnd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
NY023_17945 (serS)
Transfer RNA biogenesis [BR:
psnd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NY023_17945 (serS)
Prokaryotic type
NY023_17945 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Centrobin_CC
CEP162_C
Filament
Motif
Other DBs
NCBI-ProteinID:
WOB57105
LinkDB
All DBs
Position
complement(3826951..3828231)
Genome browser
AA seq
426 aa
AA seq
DB search
MLDSKLLRGQLQEVADRLASRGFSLDVARIESLEERRKAVQTRTEQLQAERNARSKSIGQ
AKAKGEDIAPLMADVERMANELAAGKTELDGIQAELDGILLTIPNLPDASVPVGASEDDN
VEVRRWGTPKAFDFEIKDHVALGEVSGGLDFEAAAKLSGARFAVLRGPVARLHRALAQFM
INLHTGEHGYEEHYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADFYLIPTAEVSLTN
LVAGEILDAKQLPLKLVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSKSMEA
LEGLTANAERVLQLLELPYRVLALCTGDMGFGAVKTYDLEVWVPSQDKYREISSCSNCGD
FQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPYMG
GVEVIR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctcgattccaaactgttacgcggccaacttcaggaagtggcagatcgcctggcctcc
cgtggcttcagcctggatgtcgcgcgcatcgaatcactggaagagcgccgcaaggcggtg
cagacccgcaccgagcagctgcaggccgagcgtaacgcccgttccaagtccatcggccag
gccaaggccaagggcgaagatattgcgccgctgatggctgacgtcgagcgcatggccaac
gaactggctgccggcaagaccgaactggacggcatccaggccgaactggatggcatcctg
ctgaccatccccaacctgccggacgccagcgtaccggttggtgccagcgaagacgacaac
gtcgaagtgcgccgttggggtacgccgaaggctttcgacttcgaaatcaaggaccatgtc
gccctcggcgaagtcagcggtggcctggacttcgaagctgccgccaagctgtctggcgcg
cgttttgccgtgctgcgtggtccagttgcccgcctgcaccgcgccctggcgcagttcatg
atcaacctgcacaccggcgagcacggttacgaggagcactacaccccatacctggtccag
gccccggccctgcagggtaccggccagctgccgaagttcgaggaagacctgttcaagatc
agccgcgaaggcgaggccgacttctacctgatcccgactgccgaagtgtcgctgaccaac
ctggtggccggtgaaatcctcgatgccaagcagctgccactgaagctggttgcccacacc
ccgtgcttccgcagcgaagccggtgcttccggccgtgacacccgcggcatgatccgccag
caccagttcgacaaggtcgagatggtacaggtggtcgagccgtccaagtcgatggaagcc
ctggaaggcctgactgccaacgccgagcgcgtgctgcagctgctggagctgccgtaccgc
gtgctggccctgtgcaccggcgacatgggctttggcgcggtgaagacctacgacctggaa
gtgtgggtaccaagccaggacaagtaccgcgaaatcagctcgtgctccaactgcggcgat
ttccaggcgcgccgcatgcaggcccgctggcgcaacccggaaaccggcaagccagagctg
gtgcataccctcaacggctccggcctggccgtaggccgtaccttggttgccgtactggaa
aactaccagcaggccgacggttccatccgtgtgccggaagtgctgaagccttacatgggc
ggcgtcgaggtcatccgctaa
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