Pseudomonas sp. NBB: NY023_22245
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Entry
NY023_22245 CDS
T11765
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psnd Pseudomonas sp. NBB
Pathway
psnd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psnd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NY023_22245 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psnd03400
]
NY023_22245 (ung)
Enzymes [BR:
psnd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NY023_22245 (ung)
DNA repair and recombination proteins [BR:
psnd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NY023_22245 (ung)
Prokaryotic type
NY023_22245 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WOB57894
LinkDB
All DBs
Position
complement(4805145..4805837)
Genome browser
AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKAALRAEFDQPYMHQLREFLRSEYAAGKEIYPPGPLIFNALNSTPLD
QVKVVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIASHGYLQSWA
EQGVLLLNTTMTVERANAASHAKKGWEFFTDRIIQVVSEQCPNVVFLLWGSHAQSKQKLI
DGTKHLVLKSVHPSPLSAYRGFLGCGHFSRANSFLEQRGLAPINWALPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgatcgcatcaaactcgaacccagctggaaggccgccttgcgcgcggaa
ttcgaccagccctacatgcatcagttgcgcgagttcctgcgcagcgagtacgccgccggc
aaagagatctacccgccagggccgttgatcttcaacgcgctcaactcgacgccgctggac
caggtgaaggtggtcatccttggccaggacccttaccacgggccgggccaggcgcatggc
ctgtgcttctcggtgcagccgggcgtggccacgccaccgtcgctggtcaacatctacaag
gagctgcagcgcgacctgaacatcccgattgccagtcatggctacctgcagagctgggcc
gagcagggtgtgctgttgctcaacacgaccatgaccgtggagcgcgccaatgccgcgtcg
catgccaagaagggctgggagttctttaccgaccggatcatccaggtggttagcgagcag
tgcccgaacgtggtgttcctgctgtggggctcgcatgcgcaaagcaagcagaagctgatc
gacgggaccaagcacctggtgctgaaatcggtgcatccatcaccgttgtcggcttaccgt
gggttcctggggtgcgggcatttcagccgggccaacagtttcctcgagcagcgcgggctg
gcgccgatcaactgggcattgccaccgctgtga
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