Pseudomonas sp. NBB: NY023_23515
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Entry
NY023_23515 CDS
T11765
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
psnd Pseudomonas sp. NBB
Pathway
psnd00362
Benzoate degradation
psnd01100
Metabolic pathways
psnd01120
Microbial metabolism in diverse environments
psnd01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
psnd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NY023_23515 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
NY023_23515 (pcaH)
Enzymes [BR:
psnd01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
NY023_23515 (pcaH)
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GFIT
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
Motif
Other DBs
NCBI-ProteinID:
WOB58132
LinkDB
All DBs
Position
complement(5075240..5075959)
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AA seq
239 aa
AA seq
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MPAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPDFSHLGFGAH
DHDLLLNFNNGGLPIGERIIVAGRIVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPL
DPNFGGVGRCLTDRDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFAISGPSIATKLITQLY
FEGDPLIPMCPIVKSIANPQAVQQLIAKLDMSNANPMDCLAYRFDIVLRGQRKTHFENC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccaggacaacagccgcttcgtgatccgtgatcgcaactggcacccgaaagct
cttacgcctgactacaagacgtccattgcccgttcgccacgccaggcactggtcagcatc
ccgcagtcgatcagcgaaaccaccggcccggacttttcccacctgggcttcggcgcccat
gaccatgacctgctgctgaacttcaacaacggcggcttgccgatcggcgagcgcatcatc
gttgccggccgtatcgtcgaccagtacggcaagcctgtgccgaacaccctggtggaaatg
tggcaagccaacgccggcggccgctaccgtcacaagaacgaccgctacctggcgccgctg
gacccgaacttcggtggcgtcggccgctgcctgaccgaccgtgatggctactacagcttc
cgcaccatcaagccgggcccgtacccatggcgcaacggcccgaacgactggcgcccggcg
cacatccacttcgccatcagcggcccgtcgatcgccaccaagctgattacccagctgtac
ttcgagggtgacccgctgatcccgatgtgcccgatcgtcaagtcgatcgccaacccgcaa
gccgtgcagcagttgatcgccaagctcgacatgagcaacgccaacccgatggactgcctg
gcctaccgcttcgacatcgtgctgcgcggccagcgcaagacccacttcgaaaactgctga
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