Pseudomonas sp. NBB: NY023_23745
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Entry
NY023_23745 CDS
T11765
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
psnd Pseudomonas sp. NBB
Pathway
psnd00550
Peptidoglycan biosynthesis
psnd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psnd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NY023_23745 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psnd01003
]
NY023_23745 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psnd01011
]
NY023_23745 (mrcB)
Enzymes [BR:
psnd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NY023_23745 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NY023_23745 (mrcB)
Glycosyltransferases [BR:
psnd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NY023_23745 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
psnd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NY023_23745 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
PBP1_TM
Motif
Other DBs
NCBI-ProteinID:
WOB58170
LinkDB
All DBs
Position
complement(5127433..5129754)
Genome browser
AA seq
773 aa
AA seq
DB search
MTRTRNPRTPQKRPTGRSRAWLGWALKLSLVGLVLVAGFAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFTGQKLSKNDFLTELDALGYRRESAANGPGAAAVNGNTVELNTRGFQFYEG
MEPAQFVRVRFSGDYVAGLSGANGKTLDVVRLEPLMIGGIYPKNLEDRILIKIDQVPPYL
LETLVATEDRDFYSHFGVSPKSIARAMWVNTSAGSMRQGGSTLTQQLVKNFYLTSERSLS
RKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQFFFSQPLSELKLH
QIALLVGMVKGPSYYNPRRYPDRALARRNLVLDLVAEQGVASQAEVDAAKKMPLGVTKRG
SLADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMKAETSMSETFKRLAGR
KGADEVESAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKPAVYLTALEQP
TKYTLTSWVQDEPFSVKGADGQVWRPQNYDRRPHGTIYLYQGLANSYNLSTAKIGLEVGV
PNVIKTIGRLGVNVDWPAFPAMLLGAGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQTFDPGAIYLVQNAMQRVMREGTGRSVYNTLPRNLTLAGKTGTSNDSR
DSWFSGFSQDLLAVVWMGRDDNGKTPFTGATGALQVWTSFMKKADPLPLDMPQPDNVVQA
WIDPYSGHGSDGSCPGAVQMPYIRGSEPPAGATCGGEQDPVESVMDWVKGWMN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaactcgaaatccccgtacccctcagaaacgcccgaccggccgctcccgcgcc
tggctgggctgggctttgaagctcagcctggtcggcctggtgttagtcgccggcttcgcg
gtttacctcgatgccgttgtccaggaaaagttttccggcaagcgctggaccatcccggcc
aaggtgtatgcccggccgctggagctgttcaccggccagaaactgagcaagaacgacttc
ctcaccgagctggacgcgctcggctaccggcgtgaaagcgcggccaacgggccgggagcg
gcggcagtcaacggcaacaccgtcgagctcaatacccgtggcttccagttctacgagggc
atggagccggcgcagttcgtgcgtgtgcgcttctccggcgattacgtggcaggcctttcc
ggcgccaacggcaagacgctcgacgtagtgcgcctggagccgctgatgatcggcggcatc
tacccgaaaaacctcgaagaccgcatcctgatcaagatcgaccaggtaccgccgtacctg
ctcgaaaccctggtggcgacggaagaccgcgatttctacagccacttcggggtgtcgccc
aagtccatcgcccgagccatgtgggtcaatacctcggcaggttccatgcgccagggtggc
agcaccctgacccagcagttggtgaagaacttctacctcaccagcgagcgcagcctcagc
cgcaagctgaccgaggcgatgatggccgtattgctggagctgcactacgacaagcgcgag
atcctcgaggcctacctcaacgaggtgttcgtcggccaggatggtcagcgtgcggtgcac
ggcttcggcctcgccagccagttcttcttcagccaaccgctgtcggagctgaagttgcac
cagatcgctttgctggtgggcatggtcaaggggccgtcctactacaacccgcgtcgctat
ccggaccgcgccctggcccgccgcaacctggtgctcgacctggtggccgagcagggcgtg
gccagccaggcagaagtcgatgcagcgaagaagatgccgctgggcgtgaccaagcgcggc
agcctggcagacagctcgttcccggccttcctcgacctggtcaagcgtcagctgcgccag
gactaccgcgatgaagacttgaccgaagaaggcctgcgcatcttcaccagcttcgacccg
atcctgcagatgaaggccgaaacctcgatgagcgagaccttcaagcgcctcgcggggcgc
aagggggcggacgaggttgagtcggcgatggtcgtgaccaatccggaaaccggtgaggtg
caggcgcttatcggcagccgccaggccggcttcgccggcttcaaccgcgccattgatgcc
gtgcggccgatcggttcgctggtcaagccggcggtgtacctgaccgcgctggaacaaccg
accaagtacaccttgaccagttgggtgcaggacgagccgttctcggtcaaaggtgccgac
ggccaggtctggcgcccgcagaactacgatcgtcgcccgcatggcaccatctacctgtac
caggggctggccaactcctacaacctgtcgactgccaagatcggcctggaagtgggtgtg
cccaacgtgatcaagaccattggccggctgggagtgaacgttgactggccagccttcccg
gccatgctgctgggtgccggcggcatgtcgccaatgcaggtcgcgacgatgtaccagacc
atcgccaacggcggcttcaataccccgatgcgcggtatccgcagcgtgctcaccgccgag
ggcgagccgctaaaacgctacccgttccagatccagcaaaccttcgacccgggggctatc
tacctggtgcagaacgccatgcagcgggtgatgcgcgaaggcaccggccgctcggtgtac
aacactttgccgcgcaatctcaccctggcgggcaagaccggcaccagtaacgattcgcgc
gacagctggttctccgggttcagccaggacctgctggccgtggtatggatggggcgtgac
gacaacggcaagacgccatttactggtgctaccggcgccctgcaggtgtggaccagcttc
atgaagaaggccgacccgctgccgctggacatgccgcaaccggacaacgtggtgcaggcc
tggattgacccgtacagtggccatgggtctgatggcagctgtccgggagcggtgcagatg
ccgtatattcgcgggagtgaaccgcccgccggcgcgacctgcggcggcgagcaggatcca
gttgaatcggtcatggactgggtcaagggctggatgaattaa
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