Pseudarthrobacter sp. NIBRBAC000502771: NIBR502771_00690
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Entry
NIBR502771_00690 CDS
T06121
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psni
Pseudarthrobacter sp. NIBRBAC000502771
Pathway
psni03420
Nucleotide excision repair
psni03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIBR502771_00690 (pcrA)
03430 Mismatch repair
NIBR502771_00690 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psni03400
]
NIBR502771_00690 (pcrA)
Enzymes [BR:
psni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIBR502771_00690 (pcrA)
DNA repair and recombination proteins [BR:
psni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIBR502771_00690 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NIBR502771_00690 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QDG60977
LinkDB
All DBs
Position
complement(150738..153287)
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AA seq
849 aa
AA seq
DB search
MDMLFDPYSDGPFKAAPASTARTRTEPEGVATTAGPGGMPDPQDGGLHRSGGWQQSSRNA
GNRHDDGHHGSRRPDAAQLLEGLNPQQEEAVKHGGSALLIVAGAGSGKTRVLSNRIAYLI
ATGRAHHGEILAITFTNKAAAEMRERIEALVGGRAKIMWISTFHSSCVRILRQEAANVGL
KSNFSIYDSADSLRLVTQVSKSLDLDPKKFAPKAIQHKISALKNELIDADSFASEANYND
PFEHAVADVYKGYTQRLRQANAMDFDDLIAETVYMFRAFPALAESYRRRFRHVLVDEYQD
TNHAQYALVREIVGEGPGASELTVVGDSDQSIYAFRGADIRNIVEFEKDYPEARTIKLEQ
NYRSTQNILSAANSVISRNPNRPEKRLWTAEGEGHKIIGYVGENEHDEAQFIAKEIDRLQ
DEENLRPGDVAIFYRTNAQSRSIEDVLVRVGLPYKVVGGTRFYERKEIKDALAYLRVLVN
PDDDVNLRRVLNEPKRGIGDRAEGAVAALASRERTSFMAAARRADQAPGMATRSVNAVLG
FVKMLDDLAEVAAGSGAAAALEAVLEQTGYLAALRSSTDPQDESRVENLAELVAVVREYE
QENPEGSLGAFLEQVSLVADADQIPDAPGADIDAAVAEAKRLGVVTLMTLHTAKGLEFPV
VFLTGMEHGLFPHQRSATDPNELAEERRLAYVGLTRARKRLYVTRSEVRSMWGQSQYNPA
SQFLEEIPAELLEWKREGTSRQSWAGGGSIGSGRYSGSFWGAGTSRGAAADSSAGFNADV
PAFIAKNRVQPQKEIIAVSVGDKVNHTSFGNGTVLALEGAGDKTVAKVKFDVGEKRLLLR
YAPLTKLDA
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggatatgttgtttgacccgtactctgacggaccgttcaaggccgctcctgcctccacc
gcccgcaccaggacggagcctgagggcgttgccaccacggcggggccgggcgggatgccg
gatccgcaggatggcggtcttcaccgctcaggcggctggcaacagtccagccggaacgcc
ggtaaccggcacgacgacggccaccatggcagccgccgcccggatgctgcccagctgctg
gaagggctgaacccgcagcaggaggaagcggtcaagcacggcggatccgcgctgctgatc
gtcgccggcgcgggctcgggcaagacccgcgtgctcagtaacaggatcgcctacctgatc
gccaccggccgggcgcaccacggcgaaatcctggccattaccttcaccaacaaggcggcc
gcggaaatgcgggagcgcatcgaggccctggtgggcggacgcgccaagatcatgtggatc
tccacgttccactcgtcctgcgtccggatcctgcgccaggaagcagcgaatgtcggcctc
aaatccaacttctccatctacgactccgccgactccctgcgcctggttacccaggtttcc
aagtcccttgacctggaccccaagaagtttgcgcccaaggccatccagcacaagatttcc
gcgttgaagaacgagctcatcgacgccgactcctttgcctcggaggccaactacaacgac
cccttcgaacacgcggtggcggacgtctacaagggctatacccagcgcctccggcaggcc
aacgccatggacttcgacgacctcatcgccgagaccgtctacatgttccgcgccttcccg
gccttggcagagtcataccgccgccggttccgccacgtcctggtggacgaataccaggac
accaaccacgcccaatacgccctggtcagggagatcgtgggcgaaggccctggcgcgtcg
gagcttaccgttgtgggcgactcggaccagtccatctacgccttccgcggcgctgacatc
cggaacatcgtggagttcgaaaaggactaccccgaggcccgaaccatcaaactggagcag
aattaccgctctacccagaacatcctgagtgccgccaactcggtgatctcgcgcaacccc
aacaggcccgagaaaaggctgtggacggctgaaggcgaaggccacaaaatcatcggctac
gttggcgaaaacgaacacgacgaagcgcagttcatcgccaaggagatcgaccggctccag
gacgaggagaacctccgcccgggcgacgtcgccatcttctaccgcaccaacgcccagtcc
cgttccatcgaggacgtgctggtgcgggtgggcctgccgtacaaagtggtgggcggcaca
cgtttttacgagcgcaaggaaatcaaggacgccctcgcgtacctgcgcgtcctggtgaac
ccggacgacgacgtcaacctccgccgggtgctgaacgaacccaagcggggcatcggggac
cgtgccgaaggcgccgtggcggccctcgccagccgcgaacgcacgtccttcatggcagcc
gcccgccgcgccgaccaggctccgggcatggccacccgttcggtcaacgccgtcctgggc
ttcgtgaaaatgctggacgacctcgccgaggtggccgccgggtccggggctgccgcagca
ctcgaagcggtccttgaacagaccggctacctcgcggcgctgcgctccagcaccgatccg
caggacgagtcacgcgtggaaaacctcgccgagctcgtggccgtggtccgcgagtacgag
caggagaatccggagggaagcctgggcgccttccttgaacaggtgtccctcgtggcagac
gccgaccagatcccggacgcccccggcgcggacattgacgccgccgtggccgaagccaaa
cggctgggcgtggtgacgctgatgaccctgcacacggccaagggcctggagtttcccgtg
gtgttcctgaccggcatggaacacgggctcttcccgcaccagcgctcagccaccgacccc
aacgagctcgccgaggaacgccggctggcctacgtggggctcacccgtgcccggaagcgg
ctgtacgtgacccggtccgaggtacgcagcatgtggggccagagccagtacaaccctgcc
agccagttcctcgaggaaatccccgcagagctcctggaatggaaacgggagggaaccagc
cgccagtcatgggccgggggtggttcgattggttcgggccggtacagcggttcgttctgg
ggcgccggcacctcacgcggagcggccgcggactcatcggccggcttcaacgccgacgtg
ccggctttcattgccaagaacagggtgcagccgcaaaaggagatcattgccgtcagcgtg
ggggacaaggtcaaccacaccagcttcggcaacggaacggtcctggcccttgaaggagcc
ggagacaagaccgtggcgaaggtgaagttcgacgtcggcgaaaagcgcctgctgctgcgc
tacgcccccctcaccaaactcgacgcctga
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