Pseudarthrobacter sp. NIBRBAC000502771: NIBR502771_01930
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Entry
NIBR502771_01930 CDS
T06121
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psni
Pseudarthrobacter sp. NIBRBAC000502771
Pathway
psni03030
DNA replication
psni03430
Mismatch repair
psni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIBR502771_01930
03430 Mismatch repair
NIBR502771_01930
03440 Homologous recombination
NIBR502771_01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psni03032
]
NIBR502771_01930
03400 DNA repair and recombination proteins [BR:
psni03400
]
NIBR502771_01930
Enzymes [BR:
psni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIBR502771_01930
DNA replication proteins [BR:
psni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIBR502771_01930
DNA repair and recombination proteins [BR:
psni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIBR502771_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
DnaX_C
Rad17
AAA_14
AAA_19
Serglycin
Mg_chelatase
nSTAND3
AAA_28
TsaE
Motif
Other DBs
NCBI-ProteinID:
QDG61186
LinkDB
All DBs
Position
433397..436804
Genome browser
AA seq
1135 aa
AA seq
DB search
MSARIGRVFFVTVTTALYRRYRPDSFADVIGQEHVTEPLMTALRKNRVNHAYLFSGPRGC
GKTTSARILARCLNCAQGPTDTPCGTCPSCVELARGGPGSLDVIEIDAASHGGVDDARDL
RERATYAPVRDRYKIFIIDEAHMVTSAGFNALLKIVEEPPEHIKFIFATTEPDKVIGTIR
SRTHHYPFRLVPPEPLMAYLELLCRQENVPVAPGVLSLVIRAGGGSVRDSLSVLDQLMAG
AGPNGLDYELAVALLGYTHASLLDDVVEAVAASDAATVFRAVDRVIQTGHDPRRFVEDLL
ERFRDLIIVQAMPESAHAILRGMPADQIARLQNQSHNLGAAELSRAADVTNTALTEMTGA
TSPRLHLELLCARILLPSSEQNERGMAARIDRVERRLNYAGTDVSVPATATPSQPAGAAP
APQTAAPAAARVDTPSDSHRAQEPAAQDSPAQDPPAQAGDGSPAAAQHAQGRHERPVPAA
PSLPTSGHGQDTPAVDGARSPLTPPRVSTSDWPVEEPVRGRAPQNAAAPGAPTAAQLPPA
AAPANAAPQPDAAPQSPARQVPAANQQAPGASVPSAPPAMGDVEVLRRAWPDVLQALSKI
KRSTWALVEPNAQVQAFDGSVLTLSFTTSGLAGAFGRADHSDNLRQAILKTVGIDCQIQA
VAGGANQASSEPNPKVPASPVVPATSADVAWGLAPAPAGAPAGAAPTAHAPATAAVPGTP
LGGNAENPDGAGGSNAGTTAPAARSGSSAVAASPAAASAVVPPAAAPAGGRPTEVATASA
TRGPVSGRASVNGGNAAAQPSATDAAPPTYPSAGGDYSYSDDDWGPPRDEDAPPLDEEPP
MDWEPSARPDGRTASPSPATGVPQTAAGARPGAAARTQGTPSGAPGSSTASQSDAPRADA
AHDPWTRAVEQAPGVWVVGDKSNVGAAPASGPANDNIGASADVPHYEPATAQVPPSIPVA
PAVTVPSWALGSGSGSGSGSGSGHADPVSGTYQSPSPDRAPVPEFAMAAAAPSPVTQAAT
ARAAVAPASVAPAAAPAPPRPAAAAPVPTPAAGPTQTRQSLYQRLSNSPEAEAGRAKAPA
RAAAAPSAYVQDIPSADDETIEESGVFGRAAVERILGGKLIEERSLDGSPVTPRY
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccggattggtagggttttcttcgtgacagttactaccgccctgtaccgcaga
taccgtcccgactcgttcgctgacgttatcgggcaggagcacgtcaccgagcccctgatg
acggctttgcgcaagaaccgcgtcaaccacgcctaccttttctccggccccaggggctgc
ggcaaaaccacctccgcccggatcctggcgcgctgcctcaactgcgcccagggccccact
gacaccccctgcggaacctgccccagctgtgtggaactggcccgtggcggcccgggttcc
ctcgacgtcatcgagatcgacgccgcaagccatggcggcgtggacgacgcccgtgacctc
cgtgagcgggccacctacgccccggtgcgggaccgctacaagattttcatcatcgacgaa
gcccacatggtcacctcggccgggttcaacgccctgctgaagatcgtggaagagccgccg
gaacacatcaagttcatcttcgccaccactgagccggacaaggtcatcggaaccatccgt
tcccggacccaccattacccgttccggctggtaccgcccgagccactgatggcctacctt
gagctcctgtgtcgccaggaaaacgttcccgtggcccctggggtcctgtcactggtgatc
cgcgcgggaggcggttccgtccgtgattccctctcagtcctggaccagctcatggcaggt
gccggacccaacgggctggattacgagctcgcagtggcgctgctcggctacacgcacgcc
tcgctcctggacgacgtcgtggaggccgtggccgcttccgacgccgccaccgtgttccgc
gccgtggaccgggtcatccagactggccacgatccacgaaggttcgttgaggacctgctg
gagcgcttccgcgacctgatcatcgtccaggccatgcccgaaagcgcccacgccatcctg
cgcgggatgccggcggaccagatcgcccgcctgcagaaccagtcccacaaccttggcgcc
gccgaactttcccgggctgccgatgtcaccaacacggccctgactgaaatgacgggggcc
acctcaccccggctgcacctggagttgctgtgcgcccggatcctgctccccagctccgag
cagaacgaacggggcatggccgcacggatcgaccgcgtggagaggcggctgaactacgca
gggaccgacgtcagtgtccccgcaacggcaacgccctcccagcccgcgggagcagcaccg
gcgccccaaacagcggctccggccgccgcccgcgtggacaccccctcggactcccatcga
gcacaggagccggccgcccaagactctccagcgcaggaccctccagcgcaggccggggac
ggttcgcctgccgcagcccagcatgcccagggcaggcacgaacgccctgttccggcagct
ccgtccctgcccacttccgggcacgggcaggatactccagccgttgacggcgcccgcagc
ccgcttacgccaccgcgggtcagcaccagcgactggcccgtcgaggaacctgtccgcggc
cgggcgccccagaacgccgccgctccaggggcccccactgctgcgcagctaccccccgct
gcggcgccggccaacgcagcgccgcaacccgatgctgcaccgcagtcacctgcccgccag
gtcccggcggcgaaccagcaggcacccggcgcgtccgtcccgtctgctcccccggccatg
ggagacgtggaggtccttcgccgggcgtggccggacgtcctgcaggcactgtccaaaatc
aagcgcagcacctgggcccttgttgagcccaatgcgcaggtccaggcgttcgacggcagt
gtcctgacgctgtccttcaccacatcggggcttgccggcgccttcggcagggcagaccac
tcggacaacctgcggcaggccatcctcaagactgtcggtatcgactgccagatccaggcg
gttgccggtggcgccaaccaggcgagctctgagccaaacccaaaagtacccgccagtccg
gtggttccggccacctcagctgacgttgcctgggggctggctcctgcgcctgccggggcc
cctgcgggggcagcacccactgcgcatgctcctgcaaccgcggccgtccccggcacgccg
cttggcgggaatgcggagaacccggacggcgccggaggctccaacgccgggaccaccgcc
cctgctgcccgctcgggcagttccgccgttgccgccagcccggccgcggcatccgccgtc
gttccccctgcggctgccccggccgggggccgtcccacggaagtcgccaccgcctccgcc
acccgggggccagtgtccggccgcgcgtccgtcaacggcgggaacgctgctgcccagcca
tccgccacggacgccgccccgcccacctacccatcggcaggtggtgactactcctattcc
gatgacgactggggcccgccccgggatgaggatgctcccccgctggatgaggaacctccc
atggactgggagccctcggcacgtccggacggccggacggcatcaccctcccctgccact
ggtgtcccgcagacggcagccggcgcccgcccgggcgctgccgcgcgtacccaaggcact
ccctccggcgccccgggctcgagtaccgcgtcccaatctgatgccccgcgggcggacgcc
gcccacgatccctggaccagggcggtggagcaggcgcccggcgtatgggtggttggcgac
aagagcaacgttggtgccgcacctgcatcaggcccggcaaatgacaacatcggggcatcg
gccgatgtcccgcattacgaacccgcaaccgcccaggtgccgccctccatacccgtggcc
cctgccgtaacggtgccatcctgggctctgggttccggctccggctccggctccggctcc
ggctccggccatgctgacccggtttcgggaacctaccagtcgccgtcccccgaccgcgct
ccggtacccgaattcgccatggcggctgcagccccgtcccctgttacgcaggccgcaact
gcccgcgccgccgttgccccggcttcggtggcaccggccgcggcgcccgcccctccccgg
ccagcggctgccgcgccggttcctacccctgcggccggaccaacccaaacccggcaaagc
ctctaccagcggctgtccaacagccctgaagccgaggctggacgcgcgaaggcgccggcc
agggccgctgccgccccgagcgcgtacgtccaggacatcccgagcgccgacgatgaaacc
atcgaggaatcgggcgtattcggccgggccgccgtcgaacgcattttgggcggaaaactg
atcgaggagcggtccctggacggaagccctgtgacgccacgctattga
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