Pseudarthrobacter sp. NIBRBAC000502771: NIBR502771_08620
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Entry
NIBR502771_08620 CDS
T06121
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psni
Pseudarthrobacter sp. NIBRBAC000502771
Brite
KEGG Orthology (KO) [BR:
psni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psni03032
]
NIBR502771_08620 (topA)
03400 DNA repair and recombination proteins [BR:
psni03400
]
NIBR502771_08620 (topA)
Enzymes [BR:
psni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NIBR502771_08620 (topA)
DNA replication proteins [BR:
psni03032
]
Prokaryotic type
DNA Topoisomerases
NIBR502771_08620 (topA)
DNA repair and recombination proteins [BR:
psni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIBR502771_08620 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MacB_PCD
Motif
Other DBs
NCBI-ProteinID:
QDG62376
LinkDB
All DBs
Position
1846390..1849116
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AA seq
908 aa
AA seq
DB search
MPSKAKTGKKLVIVESPAKSKTIAKYLGEGFIVEASIGHIRDLPQPSELPAELKKTSVGK
FAVDIDHDFKPYYVVSPDKKKKVTELKAALKDADELYLATDGDREGEAIAWHLLEVLKPK
VPVYRMTFGEITKEAIQRAMGNLRDVDQDLVDAQETRRVLDRLYGYEISPVLWRKVARGL
SAGRVQSVVTRMVVDRERERMAFKAASYWDLTGQFGADSGSFKAKLAAVDGAKVATGRDF
NDNGELTSRNVAHLNEELATSLAAGLQNADFRVRSVDTKPYTRRPAAPFTTSTLQQEAGR
KLRFSSKSTMQIAQRLYENGYITYMRTDSSALSDEAVTAARRQASELYGPEYIPQSPRVY
SNKAANAQEAHEAIRPAGDSFRTPAQVAKQLSGDEFRLYELIWKRTVASQMGDAKGSTAT
IRLGAVSTDGRDAEFSASGTVITFPGFLAAYEEGKDETRGDDDSDEARRLPNVAKDDSLT
ASDIQAVGHETSPPPRYTEASLTAELEKKGIGRPSTYASTISTIQDRGYVRKQGSALVPS
WIAFSVIRLLEQHFSDYVDYEFTADMEGDLDKIANGQEAGASWLRHFYFGEDSDPGLLSI
VNNLGEIDAREINSIPITDEITLRVGKFGPYLESSAAVVDPKTGEIVESARANVPEDLAP
DELTAAKAIELMETAAPEERVLGADPHTGHTVVAKNGRYGAYVTEIIPEMTDEELANQPV
EYYKNGKPKPPKKPVKAKPRTGSLFKSMTVESVTLEEALQLMSLPRALGEDAEGNLITVQ
NGRFGPYLKKGTDSRSIGSEEEIFTITLEQALEIYSQPKQRGARAAVPPLAEFGPDPVSE
KNIVVKEGRFGPYITDGITNITVPRATSLEELTREQAVELLAEKRAKGPVKRTTTRKAPA
KKKATAKK
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtgccaagcaaggccaaaaccggcaagaaactcgtgattgtggagtctccggccaagagc
aagaccatcgccaagtacctcggcgagggcttcatcgtagaggcctccatcggtcacatc
cgcgacctgccgcagccctcggaactccccgccgagctgaagaaaacctccgtgggcaag
ttcgccgtcgacatcgaccacgacttcaagccctactacgtggtgtctccggacaaaaag
aaaaaggtgaccgagctcaaggccgcgctcaaggacgccgacgaactctatctcgcaacc
gatggggaccgcgaaggcgaagccatcgcgtggcacctgctcgaggtgctcaagcccaag
gtccccgtataccggatgacgttcggcgaaatcaccaaggaagccatccagcgcgccatg
ggcaacctgcgcgatgttgaccaggacctggtggacgcccaggaaacccgccgcgtcctg
gaccgcctctatggctacgagatttcccctgtcctgtggcgcaaggtggcccgcggcctc
tccgccggccgcgtgcagtccgtggtcacccgcatggtggtggaccgcgaacgcgaacgc
atggccttcaaggctgcttcctactgggacctgaccggccagttcggtgcggactcgggc
tccttcaaggccaagcttgccgccgtggacggcgccaaggtggccaccggccgcgacttc
aacgacaacggcgaactcacctcccggaacgtggcccacctcaacgaggaactggccacc
tccctggcggcagggctgcagaacgccgacttccgggtccgctcggtggacaccaagccc
tacacacgccgtcccgctgcacccttcaccacctccacgctgcagcaagaggccggccgc
aagctgcgcttctcctccaagagcaccatgcagatcgcccagcgcctgtatgaaaacggc
tacatcacctatatgcgtacagactcctccgcgctgagcgacgaagccgtcacggcagcc
cgccgccaggcctccgaactgtacggccccgaatacattccgcagtccccgcgtgtctac
tccaacaaggccgcgaacgcgcaggaagcgcacgaggccatccgccccgccggtgactcc
ttccgcacgcctgcccaggtggccaagcagctttccggcgacgagttccgcctctacgaa
ctcatctggaagcgcaccgtcgcttcccagatgggcgatgccaagggttcgacggcgacc
atccggctcggtgccgtgtccaccgacgggagggacgcagagttctccgcctccggcacg
gtgatcacgttccccggcttcctcgcagcgtacgaggaaggcaaggacgagacccgcggc
gacgacgactccgacgaagctcgccgcctgcccaacgttgccaaggacgactcgctcacg
gcttccgacatccaggccgtgggccacgagacctccccgccaccgcgctacacggaggcc
tcgctgacagcggagctggagaagaagggcatcggccgtccgtccacctacgcctccacc
atctcaaccatccaggaccgcggctacgtccggaagcagggctcggccctggtgcccagc
tggatcgctttctccgtgatccggctcctggaacagcacttctccgattacgtggactat
gagttcaccgccgacatggaaggcgacctggacaagatcgccaacggccaggaagccggc
gcctcctggctgcggcacttctacttcggcgaggattccgatccgggcctgctgagcatc
gtcaacaacctgggcgaaatcgatgcccgcgaaatcaactccatccccatcaccgacgag
atcaccctccgggtgggcaagttcggcccttacctggaaagctctgccgccgtggtggac
ccgaaaacgggcgagatcgtcgaatcggcgcgtgccaacgtccccgaggacctggccccg
gacgaactgactgctgcaaaggccatcgaactgatggagacggcggcgcccgaggaacgc
gtgctcggcgcggatccgcacaccggacataccgtggtggccaagaatggccgctacggt
gcctacgtcacagagatcatcccggaaatgaccgacgaggaactggccaaccagccggtg
gagtactacaagaacggcaagcccaagccgccgaaaaagccggtgaaggccaagccgcgc
acgggttcgctcttcaaatccatgaccgttgaatccgtgaccctggaggaagcgctccaa
ctcatgagcctgccccgggcactgggagaggacgccgaaggcaacctcatcacggtgcag
aacggccggttcggcccgtacctgaagaaggggacggactcacgctccatcggctccgaa
gaggagatcttcacgatcaccctggagcaggcactggagatctactcgcagcccaagcag
cgcggcgcccgcgccgccgtgcccccgctggccgaattcggccccgacccggtgtccgag
aagaacatcgtggtgaaggaaggccggttcggcccctacatcacggacggcatcacgaac
atcacagtgccccgtgccacctccctcgaggaactcacgcgggaacaggcggtggaactg
ctcgccgagaagcgcgccaagggaccggtcaagcggaccaccacccgcaaggcgccggcc
aagaaaaaggccacggccaagaagtaa
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