KEGG   Pseudarthrobacter sp. NIBRBAC000502771: NIBR502771_12255
Entry
NIBR502771_12255  CDS       T06121                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
psni  Pseudarthrobacter sp. NIBRBAC000502771
Pathway
psni00521  Streptomycin biosynthesis
psni00523  Polyketide sugar unit biosynthesis
psni00525  Acarbose and validamycin biosynthesis
psni00541  Biosynthesis of various nucleotide sugars
psni01100  Metabolic pathways
psni01110  Biosynthesis of secondary metabolites
psni01250  Biosynthesis of nucleotide sugars
Module
psni_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:psni00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    NIBR502771_12255 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    NIBR502771_12255 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    NIBR502771_12255 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    NIBR502771_12255 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    NIBR502771_12255 (rfbB)
Enzymes [BR:psni01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     NIBR502771_12255 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD NAD_binding_4 RmlD_sub_bind Polysacc_synt_2 NAD_binding_10 adh_short Sacchrp_dh_NADP KR NmrA Fim1C-like_C
Other DBs
NCBI-ProteinID: QDG63023
LinkDB
Position
complement(2618990..2619988)
AA seq 332 aa
MQRLLVTGGAGFIGSNFVHYVIENTEDHVTVLDKLTYAGNLASLQGLPADRFSFVQGDIA
DPALVDGLVAEADVVVHYAAESHNDNSLHDPRPFLDTNIIGTYTLIEAARKHSKRFHHIS
TDEVYGDLELDDPERFTEQTPYNPSSPYSSTKAGSDLLVRAWVRSFGLQATISNCSNNYG
PYQHVEKFIPRQITNVIDGIRPKLYGKGENVRDWIHANDHSSAVLAIIAKGRIGETYLIG
ADGEKNNKDVVELILKHMGQAPDAYDHVVDRAGHDLRYAIDSTKLRTELGWEPRFSNFET
GIEDTIAWYRDNEDWWRPQKAATEAKYKEQGQ
NT seq 999 nt   +upstreamnt  +downstreamnt
atgcagcgacttcttgttaccggcggcgccggcttcattggctcaaactttgtccactac
gttattgagaacacggaagaccatgtcactgttctggacaagttgacctacgccggcaac
cttgcatcgctgcagggccttccagcagaccgcttctcgttcgtccaaggcgatattgcc
gaccccgccctggtggacgggctcgttgccgaagcagatgtggtggtccattacgcagcg
gaatcgcacaacgacaattcgctgcacgacccccggcccttcctcgacaccaacatcatc
ggtacctacaccctcatcgaagctgcacggaagcacagcaaacgcttccaccacatctcc
acggacgaggtctacggcgatctcgaactcgacgatcccgagcgtttcacggaacagacc
ccttacaacccgtccagcccgtactcctccaccaaggccgggtccgacctcctggtccgc
gcgtgggttcgctcatttgggcttcaggcaaccatcagcaactgctccaataactacggt
ccctaccagcacgtggaaaagttcatcccacggcagatcaccaacgtgatcgacggcatc
cggcccaagctctacggcaagggggaaaacgtccgggactggattcacgccaatgaccac
tcctcggccgtcctcgccatcattgctaaaggccgcatcggggagacctacctgattggc
gccgacggcgagaagaacaacaaggacgtcgttgaactgatcctcaagcacatgggccag
gccccggacgcctacgaccatgtggtggaccgtgctggtcatgatctgcggtatgccatc
gattcaacaaagctgcgcaccgaactcggttgggaaccccggttctcaaactttgagacc
ggcatcgaagacaccatcgcctggtatagggacaacgaggactggtggcgcccccagaag
gccgccacggaggccaagtacaaggaacagggccagtaa

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