Pseudarthrobacter sp. NIBRBAC000502771: NIBR502771_12255
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Entry
NIBR502771_12255 CDS
T06121
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
psni
Pseudarthrobacter sp. NIBRBAC000502771
Pathway
psni00521
Streptomycin biosynthesis
psni00523
Polyketide sugar unit biosynthesis
psni00525
Acarbose and validamycin biosynthesis
psni00541
Biosynthesis of various nucleotide sugars
psni01100
Metabolic pathways
psni01110
Biosynthesis of secondary metabolites
psni01250
Biosynthesis of nucleotide sugars
Module
psni_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
psni00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NIBR502771_12255 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NIBR502771_12255 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NIBR502771_12255 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NIBR502771_12255 (rfbB)
00525 Acarbose and validamycin biosynthesis
NIBR502771_12255 (rfbB)
Enzymes [BR:
psni01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NIBR502771_12255 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
adh_short
Sacchrp_dh_NADP
KR
NmrA
Fim1C-like_C
Motif
Other DBs
NCBI-ProteinID:
QDG63023
LinkDB
All DBs
Position
complement(2618990..2619988)
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AA seq
332 aa
AA seq
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MQRLLVTGGAGFIGSNFVHYVIENTEDHVTVLDKLTYAGNLASLQGLPADRFSFVQGDIA
DPALVDGLVAEADVVVHYAAESHNDNSLHDPRPFLDTNIIGTYTLIEAARKHSKRFHHIS
TDEVYGDLELDDPERFTEQTPYNPSSPYSSTKAGSDLLVRAWVRSFGLQATISNCSNNYG
PYQHVEKFIPRQITNVIDGIRPKLYGKGENVRDWIHANDHSSAVLAIIAKGRIGETYLIG
ADGEKNNKDVVELILKHMGQAPDAYDHVVDRAGHDLRYAIDSTKLRTELGWEPRFSNFET
GIEDTIAWYRDNEDWWRPQKAATEAKYKEQGQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgacttcttgttaccggcggcgccggcttcattggctcaaactttgtccactac
gttattgagaacacggaagaccatgtcactgttctggacaagttgacctacgccggcaac
cttgcatcgctgcagggccttccagcagaccgcttctcgttcgtccaaggcgatattgcc
gaccccgccctggtggacgggctcgttgccgaagcagatgtggtggtccattacgcagcg
gaatcgcacaacgacaattcgctgcacgacccccggcccttcctcgacaccaacatcatc
ggtacctacaccctcatcgaagctgcacggaagcacagcaaacgcttccaccacatctcc
acggacgaggtctacggcgatctcgaactcgacgatcccgagcgtttcacggaacagacc
ccttacaacccgtccagcccgtactcctccaccaaggccgggtccgacctcctggtccgc
gcgtgggttcgctcatttgggcttcaggcaaccatcagcaactgctccaataactacggt
ccctaccagcacgtggaaaagttcatcccacggcagatcaccaacgtgatcgacggcatc
cggcccaagctctacggcaagggggaaaacgtccgggactggattcacgccaatgaccac
tcctcggccgtcctcgccatcattgctaaaggccgcatcggggagacctacctgattggc
gccgacggcgagaagaacaacaaggacgtcgttgaactgatcctcaagcacatgggccag
gccccggacgcctacgaccatgtggtggaccgtgctggtcatgatctgcggtatgccatc
gattcaacaaagctgcgcaccgaactcggttgggaaccccggttctcaaactttgagacc
ggcatcgaagacaccatcgcctggtatagggacaacgaggactggtggcgcccccagaag
gccgccacggaggccaagtacaaggaacagggccagtaa
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