Pseudarthrobacter sp. NIBRBAC000502771: NIBR502771_12565
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Entry
NIBR502771_12565 CDS
T06121
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
psni
Pseudarthrobacter sp. NIBRBAC000502771
Pathway
psni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIBR502771_12565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psni03021
]
NIBR502771_12565
03019 Messenger RNA biogenesis [BR:
psni03019
]
NIBR502771_12565
Transcription machinery [BR:
psni03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NIBR502771_12565
Messenger RNA biogenesis [BR:
psni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NIBR502771_12565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
QDG63077
LinkDB
All DBs
Position
2686959..2689097
Genome browser
AA seq
712 aa
AA seq
DB search
MTETTELSPAVEHTTSAAESSAAPAKSSGLAGLKLAQLQALASQLGISGGSRMRKGDLVS
AISAHRAGNLTVKTPAKAADKASESTVAPAAAAPEAATAEAPAAEGTRARGRGRSRRAVS
DGVVAPAAEAPAVETAAAPATAAVEAPSAAPAESTEASEGAPERRQPRTRNRRRSEAAAA
SIQEAPVETPAEQPATEQRAGEQRAGEQRTEAPAEAGDAGQRTERRDGGRTRGRDNTRDS
DGGRDNSGSRDAGQRDGGRDNRDNDDSDGGSRRNRRNRRDRNDRNDRSGGQDRDNSRNDR
FRDRNDRRRGRNQGPDVDDVEVTDDDVLLPVAGILDVLENYAFIRTSGYLPGPNDVYVSL
AQVKKYNLRKGDAVVGAIRAPREGEDRSQQSNRQKFNALVRVTSVNGKTPEELKDRVEFA
KLVPLYPSERLRLETDPKKIGPRVIDLVAPIGKGQRGLIVSPPKAGKTLILQSIANAITT
NNPEVHLMMVLVDERPEEVTDMQRTVKGEVIASTFDRPADDHTTVAELSIERAKRLVEMG
MDVVVLLDSMTRLGRAYNLAAPASGRILSGGVDSAALYPPKRFFGAARNIENGGSLTILA
TALVETGSKMDEVIFEEFKGTGNMELRLSRQLADKRIFPAVDVNASGTRREENLLSPEEV
KIMWKLRRVLSGLETQQSLELLTNKIRETQSNVEFLMQVQKTTLGAKSDNDK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccactgagctgtcgccagctgtggaacacacaacttctgctgccgaatca
tcggcagcacccgccaagagcagcggccttgccggccttaagctcgcccagctgcaggcc
ctcgccagccagctcggtatctccggcggctcccgcatgcgcaagggggacctggtctcg
gccatctccgcccaccgcgcaggcaacctgaccgtcaagacccctgccaaggcagcggac
aaggcttcggaaagcaccgtggctccggctgcagccgctccggaagcagccaccgcagaa
gctcccgccgctgaaggcacccgtgcccgcggacgcggccgcagccgccgcgccgtcagc
gacggcgtggtagccccggcagccgaagctcccgccgtggaaaccgctgcggcgcctgcc
accgcggccgttgaggcgccgtcggccgcccccgcggaaagcaccgaggcatccgaaggc
gcccccgagcgccgccagccccgcacccgcaaccgccgccgcagcgaagccgctgccgcc
tccatccaggaagcgccggtggaaaccccggcagaacagccggcaacggaacagcgtgca
ggcgagcagcgtgcaggtgaacagcgcaccgaagcccccgcagaagcaggggacgccggg
cagcgcaccgaacgccgcgatggcggccggacacgcggccgcgacaacacccgcgattcc
gacggcggccgcgacaacagcggcagccgcgacgccggccagcgcgacggcggccgggac
aaccgggacaacgacgactccgacggcggaagccgccgcaaccgccgcaaccgccgcgac
cggaatgaccgcaacgaccgctccggcggccaggaccgggacaactcccgcaacgaccgc
ttccgcgaccgcaacgaccgccgccgcggccgcaaccagggaccggacgtggacgacgtt
gaggttaccgacgacgacgtcctgctgccggttgccggcatcctcgacgttctcgagaac
tacgcgtttatccgcacctccggctacctgcccggccccaacgacgtctacgtctccctg
gcccaggtcaagaagtacaacctgcgcaagggcgacgccgtggtgggtgccatccgtgca
ccccgcgaaggcgaagaccgcagccagcagtccaaccgccagaaattcaacgccctggtg
cgcgttacgtccgtcaacggaaagacgcccgaagaactcaaggaccgcgtcgagttcgcc
aagctggttccgctctacccgtcggagcgcctgcgcctcgagaccgaccccaagaagatc
ggtccccgcgtcatcgacctcgtggccccgatcggaaagggccagcgcggcctgatcgtc
tccccgcccaaggccggcaagacgctcatcctgcagtccatcgccaacgccatcaccacc
aacaaccctgaggtccacctcatgatggtgctggtcgacgaacggccagaagaagtcacg
gacatgcagcgcaccgtcaagggtgaggtcatcgcctccaccttcgaccgtcccgccgac
gaccacaccaccgtggccgaactctccatcgaacgcgccaagcgcctggtggaaatgggc
atggacgtggtggtcctgctggactccatgacccgcctgggccgcgcctacaacctggca
gcaccggcctccggccgcatcctgtccggtggcgtggactccgcagccctctacccgccc
aagcgcttcttcggtgccgcccgcaacatcgaaaacggcggatcgctcaccatcctggcc
accgccctcgtcgagactggttccaagatggacgaggtcatcttcgaagagttcaagggc
accggcaatatggaactccgcctgtcccgccagctggccgacaagcgcatcttcccggcc
gtggatgtcaacgcatccggcacccgccgcgaagagaacctgctctcgcccgaagaagtc
aagatcatgtggaagctgcgccgcgtcctctccggactcgaaacccagcagagccttgag
ctgctcaccaacaagatccgggaaacccagagcaacgtcgagttcctcatgcaggtccag
aagacgacgcttggtgctaagtcggataacgacaagtag
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