Pseudarthrobacter sp. NIBRBAC000502771: NIBR502771_19850
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Entry
NIBR502771_19850 CDS
T06121
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psni
Pseudarthrobacter sp. NIBRBAC000502771
Pathway
psni03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIBR502771_19850 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psni03400
]
NIBR502771_19850 (xth)
Enzymes [BR:
psni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NIBR502771_19850 (xth)
DNA repair and recombination proteins [BR:
psni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NIBR502771_19850 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QDG64340
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Position
complement(4283134..4283967)
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AA seq
277 aa
AA seq
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MSSALNKDHLRIASVNVNGLRAAYKNGMAAWLEPREVDILCLQEVRAPDAIVRELLGEGW
HILHAEAEAKGRAGVAIASRQEPLETRNGIGDDYFATAGRWVEADFRVPDAAGNPVQLTV
ASAYVHSGEAGTPKQDDKYRFLDVMSTRLPELTKHSDHALVVGDLNVAHTPRDIRNSKGN
LKKAGHLPEERAYFDRFFGEEIGWHDVHRNLAGDVDGPYTWWSWRGKAFDNDTGWRIDYH
MATPGLAASAISAVVDRAASWDTRFSDHAPLVVDYQL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcggcattgaacaaggaccaccttcgcatcgcatcagtcaacgtcaacggcctc
cgggctgcctacaaaaacggcatggcggcgtggctggagccgcgcgaagtggacatcctc
tgcctgcaggaagtgcgcgcccccgacgcgatcgtccgggagttgctcggggaaggatgg
cacatcctgcacgccgaggcggaagcaaaaggccgtgccggcgtcgccatcgcctcccgc
caggagccgctcgaaaccaggaacggcattggggacgactacttcgccacggccgggcgc
tgggtggaggctgatttccgcgttccggacgccgccgggaaccccgtccagctcaccgtt
gccagcgcctacgtgcactccggtgaggcagggacacccaagcaggacgacaagtaccgc
ttccttgacgtcatgagcacccggcttccggagctgaccaagcacagcgaccacgcgctg
gtggtgggggacctgaatgtcgcccacacgccccgggacattcggaactccaagggcaac
ctcaagaaagccggccacctgccggaggaacgcgcctactttgaccgtttctttggtgag
gaaatcggctggcatgacgtccaccggaaccttgccggcgacgtcgacgggccgtacacg
tggtggtcctggcgcggcaaggcgttcgataacgacaccgggtggcgcatcgactaccac
atggccacccccggactggcagcgtccgccatttcggccgttgttgaccgtgcagcctcc
tgggatacccgcttctccgatcacgccccgctggtagtggactaccagctctga
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