Pseudomonas sp. NS1(2017): CI807_00020
Help
Entry
CI807_00020 CDS
T11105
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns03410
Base excision repair
psns03430
Mismatch repair
psns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CI807_00020 (recJ)
03430 Mismatch repair
CI807_00020 (recJ)
03440 Homologous recombination
CI807_00020 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psns03400
]
CI807_00020 (recJ)
DNA repair and recombination proteins [BR:
psns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CI807_00020 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CI807_00020 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CI807_00020 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ASV34631
UniProt:
A0A223VH05
LinkDB
All DBs
Position
complement(4605..6314)
Genome browser
AA seq
569 aa
AA seq
DB search
MRIDPRPLPAVLPFLGELPPLLTRLYAARGVQSEAELDKSLARLIPYQQLKGIDAAVDLL
VTALEQRQRILIVGDFDADGATASTVGTLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQREPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLPGDELPAADAIVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGWYDNKPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKRDASRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLTTDVAAAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDPEWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALAVVASQHPNLIAKYGG
HAMAAGLTLPEENFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPVFHGVFQLVEQRVVGERHLKVVLKTECGSVKLDGIAFGVDREVWPNPTVR
WVELAYKLDVNEFRGNETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgatcctcgcccgttacctgctgtcctgccgtttctcggtgaactgccaccg
ctcttgactcgtctctacgccgcgcgcggggtgcagtccgaggccgagctggataaaagc
ctggcgcggttgattccctaccagcagctcaagggtatcgacgcggcggtggacttgctg
gtgaccgccctggagcagcgccagcgcatcctcatcgtaggtgactttgacgccgatggc
gccaccgccagcaccgtgggcaccctgggcctgcgtttgctcggtgcggcccatgtcgat
tacctggtgcccaaccgtttcgagtacggctacggcctgaccccggaaatcgttgcagtc
gccctgcagcgcgagccgcagttgctgatcaccgtggacaacggcatttccagcgtcgaa
ggcgtggcggcggcgaaagctgcggggttgcaggtgttggtgacggaccaccacttgcct
ggtgatgagttgccggcggcagatgccatcgtcaatccgaaccagcccggctgtgagttc
ccgagcaaggcgctggctggcgtgggtgtgatcttttatgtgctgatggccctgcgcgca
cgcctgcgcagcttgggctggtacgacaacaagccgcaacccaacatcggtgaattactc
gacctcgttgccctgggcagcgtcgccgacgtagtgcccctggacgccaacaaccgcatc
ctggtgcatcagggcctggagcgtatccgcgctggccgtgcgcggccggggatcaaggcg
attctggaagtggccaagcgcgacgcttcgcgtatcacctccaccgatttgggatttatc
cttgggccacgcctgaacgctgcgggtcgcctggatgacatgagcctgggcatcgaatgc
ctgctcaccaccgacgttgccgccgcgcgggaaatggccgcgcaactggacggcatgaac
caggatcgcaaatccatcgagcaaggcatgcagcgcgaggcgctggcccagctcaaggac
ttgccggtggagtcgatgccctatggcttgtgcctgttcgacccggaatggcaccagggt
gtgatcgggattctcgcgtcgcgtatgaaagaacgttacttccgcccgaccatcgccttc
gctgacgccggtgatggcctgctcaagggctctgggcgctctgtgcagggttttcatatc
cgtgatgcgctggcagtggttgcgagccagcatcccaacctgatcgccaaatacggcggt
cacgccatggcggcggggctgacgttgcccgaagaaaatttcccactgtttgccgaagcc
tttgatgctgaagtgcgtcggcaactgcgtgaagaagatttgacgggacgcttgttgtct
gacggcaccctggcggtggaagagtttcacttggaactggcccgcgcgttgcgacatgcc
gggccgtgggggcagcactttcccgagccggtctttcacggcgtattccagttggtggag
cagcgcgtggtgggtgagcggcacctgaaggtggtgctcaagactgaatgcgggtcagtg
aaactcgatggcattgccttcggagtggaccgtgaggtctggccgaacccgaccgtgcgt
tgggtggagttggcgtacaagctggatgtgaacgagtttcgtgggaatgagacggtgcaa
ctgatgattgcccacatcgaaccgcgctag
DBGET
integrated database retrieval system
