Pseudomonas sp. NS1(2017): CI807_00235
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Entry
CI807_00235 CDS
T11105
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
psns Pseudomonas sp. NS1(2017)
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psns03000
]
CI807_00235 (treR)
Transcription factors [BR:
psns03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CI807_00235 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_41
Rrf2
HTH_11
HTH_IclR
HTH_36
TrmB
DIP2311-like_C
Motif
Other DBs
NCBI-ProteinID:
ASV34671
UniProt:
A0A223VH49
LinkDB
All DBs
Position
51814..52518
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AA seq
234 aa
AA seq
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MSKYNQIYTDLLASITTERLQRGTRLPSETELMDSYQASRGTVRRAIEQLQERGFAQKIH
GKGTFVLSPNPIEFQLGGIVSFHETHADLGDDVRTEVVEFTQFPLEGSLLQHIEAEPGTL
ITRIKRVRRIGGKRVILDINHFVADVIPGLDRSIAEQSIYAFIEQTLQLQIAYAQRTIEA
LPRGKDDQTHLDLEGQSHVIVVSNQTFLQDGRQFEYTESRHTLDKFYFSDIARR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatacaaccagatctacacggatctgcttgccagcatcaccaccgaacgcctg
cagcgcggcacacgccttccctccgaaacagaactgatggacagctaccaggccagccga
ggcacggtgcgccgggctatcgagcaactgcaggaacgtgggtttgcgcaaaagattcac
ggcaagggcaccttcgtgttgtcgcccaacccgattgagttccaattgggcggcatcgtc
agcttccacgaaacccacgccgacctgggcgatgacgtacgcaccgaagtggtcgaattc
acgcagttcccgctggaaggttcgctgctgcaacacatcgaagccgaacccggcaccctg
atcacccgcatcaaacgggtacggcgcatcggcggcaaacgggtgatcctcgacatcaac
cacttcgtcgctgacgtgattccggggttggaccgctcgattgccgaacagtcgatctac
gcgtttatcgaacagacgttgcagctgcaaatcgcctacgcccaacgcaccatcgaagcc
ctgccacgcggcaaggacgaccagacacacctcgaccttgaaggccagagccatgtgatc
gtggtgagcaaccagacatttttgcaggacggacggcagttcgagtacaccgagtcgcgg
catacgttggataagttttacttttcggatattgcgcggcggtaa
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