Pseudomonas sp. NS1(2017): CI807_01820
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Entry
CI807_01820 CDS
T11105
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psns Pseudomonas sp. NS1(2017)
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psns03016
]
CI807_01820
Enzymes [BR:
psns01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CI807_01820
Transfer RNA biogenesis [BR:
psns03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CI807_01820
Prokaryotic type
CI807_01820
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
ASV34966
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All DBs
Position
complement(382249..383166)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPIGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLQVRDVTVGRADIEAALPGFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLNWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcattctgctcgataagccc
attggctttacctccaatgccgcgttgcagaaggttcgctggctgctcaacgccgaaaag
gccgggcacaccggcagcctcgatcccttggccaccggtgtactaccgttgtgcttcggc
gaggccaccaagttctcgcaatacctgctcgattccgacaaggggtacgaaaccctgatg
caattgggcaagaccaccaccacggccgacgccgaaggtgatgttctgcaggttcgcgac
gtgaccgttggtcgtgcagatatagaagcggctttacccggttttcgtgggcaaatcagt
cagataccgccgatgtactcggcgctcaagcgtgatggccagcctctttacaagctggca
cgtgcgggcgaagtagtggagcgtgaaccgcgttctgttactattgcgcgcttggaattg
ctcgcctgtgaaggcgacactgcccgcttggccgtggactgcagcaaaggcacctatatc
cgtaccttggtggaagatatcggtgaacagctcggttgcggtgcgtacgttgcagaactg
cgacgcacccaggccggccctttcagcctggcccagacggtcacgctggaagagttggag
gccgtacacgccgaaggcggcaacgaagcggttgatcgcttcctgatgccatcggacagc
ggtttgctgaattggccattgctgcacttttcggagcacagcgcgttctactggctcaac
ggccagccggtacgtgccccggatgctccgaagttcggcatggtgcgggtacaggatcat
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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