Pseudomonas sp. NS1(2017): CI807_03375
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Entry
CI807_03375 CDS
T11105
Name
(GenBank) LPS biosynthesis protein
KO
K04744
LPS-assembly protein
Organism
psns Pseudomonas sp. NS1(2017)
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psns02000
]
CI807_03375
Transporters [BR:
psns02000
]
Other transporters
Pores ion channels [TC:
1
]
CI807_03375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
LptD_N
OstA_2
Motif
Other DBs
NCBI-ProteinID:
ASV35260
UniProt:
A0A223VJ33
LinkDB
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Position
693169..695979
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AA seq
936 aa
AA seq
DB search
MALKSPAFRRKFPLLVTGSLLALQPFATSFVVAAEQYDCSVSASGAWDCAPKTAAAPLPP
RPVHDGAAISSANSTAQADAGGNAEAEPKTALVTESKGRGLRSRSADYSHLDWVPREKLT
AAQLAETGPYCGGAYIEPTRPGMNDKTNKSDAPTFIGAKASRYEQEQQVATLAGDVVMRQ
GSMQLESEEASLYQAENRGELNGKVRLRDNGALIVGDHAEVQLDTGAAQIDNAEYVLHKS
RIRGNALYAKRAENAIIRLKDGTYTTCEPDSNAWQLRGNNITLNPATGFGTATNATLRIK
NIPILYTPYIYFPIDDRRQSGFLPPSFSTGSETGFTLVTPYYFNLAPNYDATLYPQYMTK
RGLLMEGEFRYLTKSSEGQFGGAYLNDDNDERKKQTDYEKTRYMLNWQHKGGLDSRVATQ
VDYTRISDPYYFQDLKSFQEGVESRDALNQQGSVTYRGDTYQARLNLQAYQLATISQITP
YDRLPQITFNGALPYHPGGLNFTYETEAVRFERSLEKGTFTDQDGLVSPRLDTYVTGLTR
ANGTRLNVAPAVDYPMNWTYGFITPKLKYVYTKYDLDLDNIGKNQIIAQQAAATAAKPYA
GGDFKSSQDRAVPIASVDSGLYFDRNTNWFGKDYRQTLEPRAFYLYVPNKDQADIPVFDT
SEYSFSYASLFRDNRFSGTDRIGDENKLSLGLTSRWIEENGFERQRVSVGQAVYFKDREV
QLPGILAADRADAQSDVSPVALDYEFRFNRDWRATADYNWDTEEHSPRSGSAMLHYQPED
NPNKIINVGYRYRNDQVVYNQLTGKWQFGGDYGQPGDANFVKDYYKIQQHDFSMMWPIIP
QWNLITRWQYDYARNRTLEAFGGFEYDNCCWKLRVINRYWVSNDEYSQIAPLNEKGDHGL
FFQIVLKGLGGLTGAKVESFLDKGIEGYREREDQAF
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaaatcccccgcgtttcgtagaaaatttccgttgctggtaaccggcagtctg
ctggccttgcaacccttcgccacctcattcgtggtcgccgcggaacagtatgactgctca
gtctctgcttcgggtgcctgggattgcgcgccgaaaaccgccgcagccccgctaccaccg
cgcccggtgcatgatggcgccgccatcagctccgccaacagcacggcgcaggccgatgct
ggcggcaacgccgaggccgagcccaagaccgcactggtcaccgaatccaagggccgtggc
ctgcgctcgcgcagcgccgactacagccacctggactgggtgccccgcgagaagctgacc
gcagcgcagctggccgaaaccggcccgtactgcggcggtgcgtacatcgagccgactcgt
cctggcatgaacgacaagacgaacaagagcgatgcgcccaccttcatcggcgccaaggcc
tcgcgttacgagcaggaacagcaagtcgcgaccctggccggtgacgtggtcatgcgccag
ggcagcatgcagttggaatctgaagaagccagcctgtaccaggccgagaaccgtggcgag
ctgaacggcaaggtccgtctgcgcgacaacggtgcgctgatcgtgggcgaccacgccgaa
gtgcaactcgacaccggcgcggcccagatcgacaacgccgaatacgtgctgcacaagtcg
cgcatccgcggtaacgcgctgtacgccaagcgtgctgaaaacgcgatcatccgtctcaag
gacggtacgtacaccacctgcgagccagacagcaacgcctggcagctcaggggcaacaac
atcacgttgaacccggccaccggtttcggtaccgccaccaacgcgacgttgcggatcaag
aacatcccgatcctctacaccccttacatctatttcccgatcgacgaccgtcgtcaatcc
ggcttcctgccgccgagcttcagcaccggcagcgaaaccggcttcaccctggtgacgccg
tactacttcaacctggcgcccaactacgacgccacgttgtacccgcaatacatgaccaag
cgcggcttgttgatggaaggcgaattccgctacctcaccaaatccagcgaaggccagttc
ggcggcgcgtacctgaacgacgacaacgacgaacgcaaaaagcagaccgattacgaaaaa
acccgctacatgctcaattggcagcacaagggcgggttggattcgcgtgtagcgacccag
gtggattacacccgcatcagcgatccttactacttccaggatttgaagtcgttccaggaa
ggcgttgaaagccgggatgccctcaatcaacagggttccgtgacctaccgcggcgacact
taccaggcgcgcctgaacctccaggcttaccagctggcaacgatctcccagatcacgccg
tatgaccggttgccgcagatcaccttcaatggtgcgctgccgtaccatccgggcgggctg
aactttacctatgagactgaagctgttcgctttgaacgcagccttgaaaaaggcacgttt
accgatcaggacggacttgtgtcgcctcgtctggatacctacgtcaccggcctgacccgc
gccaacggcacgcggttgaatgttgcgccagccgtcgactacccgatgaactggacctac
gggtttatcacgccaaagctcaagtacgtttacaccaagtacgatcttgacctggacaac
atcggcaagaaccagatcatcgcccagcaagcagctgccactgcggccaaaccgtacgct
ggtggcgacttcaagagttcgcaagaccgcgccgtgcccattgccagcgtcgacagcggc
ctctatttcgaccgcaacaccaactggttcggcaaagattatcgccagacccttgagccg
cgtgcgttctacctgtacgtaccgaacaaggaccaggctgatatcccagtcttcgacacc
agcgaatactcgttcagctacgcgtcgctgttccgcgataaccgcttcagcggcaccgac
cgtatcggcgacgagaacaagctgtccctgggcttgaccagccgctggatcgaagagaac
ggcttcgagcgtcagcgcgtatccgtcggccaggccgtgtacttcaaggaccgtgaagtt
caactgccgggtatcctggcggctgaccgtgccgatgcacagtcggatgtttcgccggtt
gccctggactacgagttccgcttcaaccgcgactggcgcgccactgccgactacaactgg
gacaccgaggaacacagccctcgttccggcagcgcaatgctccactaccagccggaagac
aacccgaacaagatcatcaacgtcggttatcgctaccgtaacgaccaggtcgtctacaac
cagctgaccggcaaatggcagttcggtggtgactacggccagccaggcgatgcgaacttc
gtgaaggattactacaaaatccagcaacacgacttttcgatgatgtggccgatcattcct
cagtggaacctgatcacccgctggcagtatgactacgctcgcaaccgtacccttgaagcc
ttcggtggtttcgagtacgacaactgctgctggaaactgcgcgtcatcaaccgttactgg
gtttccaacgacgaatacagccagatcgccccgcttaacgaaaagggtgaccacgggctc
ttcttccagatcgtcctcaaaggactcggcggcctgaccggcgccaaggtagagagcttc
ctcgacaaaggcattgaaggttatcgtgaacgtgaagaccaagctttctga
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