Pseudomonas sp. NS1(2017): CI807_03755
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Entry
CI807_03755 CDS
T11105
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns03030
DNA replication
psns03430
Mismatch repair
psns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CI807_03755
03430 Mismatch repair
CI807_03755
03440 Homologous recombination
CI807_03755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psns03032
]
CI807_03755
03400 DNA repair and recombination proteins [BR:
psns03400
]
CI807_03755
Enzymes [BR:
psns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CI807_03755
DNA replication proteins [BR:
psns03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CI807_03755
DNA repair and recombination proteins [BR:
psns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CI807_03755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ASV35332
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All DBs
Position
772760..773467
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AA seq
235 aa
AA seq
DB search
MSLFNWLRKKTPGLDSAQQQRLAQLRKPTPLGEDTLRSQRWVVVDLETSGLNLNRDQVLS
IGAVVIEDGAVDFSQLFERTLQRAETKLSPSVLIHGLGPSAIAAGSDPVDALLDFMDFVG
DSPLLAFHAPFDQHMLCRALKDSLGYRLAHPFLDVADIAPLLCPDAHIREAGLDDWINHF
HLHVGERHHASADALATAELMLILFSRARQQHIDTPQGLQERLSQWKRRQHAPSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttgttcaactggctgcgcaagaaaacgccggggctcgacagcgcgcaacagcag
cgcctggcgcaactgcgcaaacccacgccgctgggggaagacaccctgcgcagccagcgc
tgggtggtggtggacctggaaaccagcggcctcaacctcaaccgtgaccaggtgttgtcc
atcggcgcggtggtgatcgaagacggcgcggtggatttctcgcaactgttcgaacgcacc
ttgcaacgggctgaaaccaaactcagccccagtgtgttgatccacggcctcggccccagt
gcgattgccgccggcagcgatccggtcgacgcgttactggacttcatggactttgtgggc
gacagcccattgctcgccttccatgcgccattcgatcaacacatgctgtgccgggcgctc
aaggacagcctgggttaccgcctggcccatccgtttctcgatgttgcagacatcgccccg
ctgctgtgcccggatgcgcatatccgtgaagccgggttggacgattggatcaaccacttc
catctgcatgtgggtgaacgtcatcacgccagcgccgacgccctggccacggcggagctg
atgctgatcctgttcagccgcgcgcgccagcagcacatcgacacgcctcaggggctgcaa
gagcgtttgagccaatggaaacggcgtcaacacgcgccatcgttttaa
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