KEGG   Pseudomonas sp. NS1(2017): CI807_03760
Entry
CI807_03760       CDS       T11105                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psns  Pseudomonas sp. NS1(2017)
Pathway
psns02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psns00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CI807_03760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psns03021]
    CI807_03760
Transcription machinery [BR:psns03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CI807_03760
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Rv2175c_wHTH HTH_29 Sigma70_ECF HTH_24 BrxR_CTD HTH_17 Sigma70_r3 MerR
Other DBs
NCBI-ProteinID: ASV35333
LinkDB
Position
773568..774086
AA seq 172 aa
MSSIQNPHSELVGALYRDHRGWLLAWLRRNVACPSRAEDLSQDTFMRLLGRDELREPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPESEHPSPEEQQLILEDLKAIDRLLGKL
SSKARAAFLYNRLDGMGHAEIAQRLGVSVPRVRQYLAQGIRQCYVALYGEPL
NT seq 519 nt   +upstreamnt  +downstreamnt
ttgtcgtcgatccagaacccacacagtgagcttgttggcgcgttgtatcgcgaccatcgt
ggctggctgctggcctggcttcgacgcaacgtggcctgcccgagccgcgccgaagacctg
agccaggacaccttcatgcgcctgctcggccgtgatgagctgcgcgaaccccgcgaaccc
cgggcgtttctggtggcaatcgccaagggcttgttgttcgactatttccgtcgcgccgcc
ctggagcaggcttacctcaccgaactgatgctgatcccggaaagcgaacacccgtcgccg
gaagaacagcaactgatcctcgaagacctcaaagccatcgaccgcctgctcggcaagctg
tcgagcaaggcccgcgccgccttcctctataaccgcctcgacggcatgggccacgccgaa
atcgcccagcgcctcggcgtgtcggtaccccgcgtgcggcagtacctggcccagggcatt
cgccagtgctacgtcgcgctgtatggcgagccgctgtga

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