Pseudomonas sp. NS1(2017): CI807_03760
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Entry
CI807_03760 CDS
T11105
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CI807_03760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psns03021
]
CI807_03760
Transcription machinery [BR:
psns03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CI807_03760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_29
Sigma70_ECF
HTH_24
BrxR_CTD
HTH_17
Sigma70_r3
MerR
Motif
Other DBs
NCBI-ProteinID:
ASV35333
LinkDB
All DBs
Position
773568..774086
Genome browser
AA seq
172 aa
AA seq
DB search
MSSIQNPHSELVGALYRDHRGWLLAWLRRNVACPSRAEDLSQDTFMRLLGRDELREPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPESEHPSPEEQQLILEDLKAIDRLLGKL
SSKARAAFLYNRLDGMGHAEIAQRLGVSVPRVRQYLAQGIRQCYVALYGEPL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtcgatccagaacccacacagtgagcttgttggcgcgttgtatcgcgaccatcgt
ggctggctgctggcctggcttcgacgcaacgtggcctgcccgagccgcgccgaagacctg
agccaggacaccttcatgcgcctgctcggccgtgatgagctgcgcgaaccccgcgaaccc
cgggcgtttctggtggcaatcgccaagggcttgttgttcgactatttccgtcgcgccgcc
ctggagcaggcttacctcaccgaactgatgctgatcccggaaagcgaacacccgtcgccg
gaagaacagcaactgatcctcgaagacctcaaagccatcgaccgcctgctcggcaagctg
tcgagcaaggcccgcgccgccttcctctataaccgcctcgacggcatgggccacgccgaa
atcgcccagcgcctcggcgtgtcggtaccccgcgtgcggcagtacctggcccagggcatt
cgccagtgctacgtcgcgctgtatggcgagccgctgtga
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