Pseudomonas sp. NS1(2017): CI807_04115
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Entry
CI807_04115 CDS
T11105
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
psns Pseudomonas sp. NS1(2017)
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psns03009
]
CI807_04115
Enzymes [BR:
psns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CI807_04115
Ribosome biogenesis [BR:
psns03009
]
Prokaryotic type
rRNA helicases
CI807_04115
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
ASV35398
UniProt:
A0A223VK49
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All DBs
Position
852070..853455
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AA seq
461 aa
AA seq
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MTTIATAFNTLPLSAAMLANLDSLGYVEMTQIQAQSLPVILKGLDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVMCPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSLGPQIA
SLEHGAHVIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLDMGFYDAIEDIISKTPPR
RQTLLFSATYPVSIKQLASKFMRAPQQVKAEAFHSDDQIEQRFYEISPEERMDAVTKVLA
HFRPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDSLDMVINVELARDSEIHIHRVGRTGRAGETGIAISLVAPSEAHRAQAIE
QLQKSPLNWDQLDNLKPQSGGPLLPQMSTLCIAAGRKDKVRPGDILGALTGEAGIPGAQV
GKIAIFDFQAFVAVERGIAKQALQRLNDGKIKGRSLRVRIL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgactaccatcgccaccgcttttaatactttgcccctgtccgccgccatgctggctaac
ctcgactcgctgggttatgtcgagatgacgcagatccaggcgcaaagcttgccggtgatc
ctcaaggggctggacctgattgcccaggccaagaccggcagcggcaagaccgccgccttc
ggcatcggcctgttgaacccgatcaacccgcgttacttcggctgccaggcgctagtgatg
tgcccgacccgtgagctggccgaccaggtcgccaaggaaatccgccgcctggcccgtgcc
gaagacaacatcaaggtactgaccctgtgcggcggcgtgtcccttggcccgcagatcgct
tccctggaacacggcgcccacgtcatcgtcggcacgccgggccgcatccagcagcacttg
cgcaagggctcgctggtcctcgacggcctgaacacgctgatcctcgacgaagccgaccgc
atgctcgacatgggcttctacgacgccatcgaagacatcatcagcaaaaccccgccacgc
cgacagaccctgctgttctcggccacttacccggtgagcatcaagcagcttgcttccaaa
ttcatgcgtgcgccgcagcaagtgaaggccgaagcgttccactccgatgaccagatcgag
cagcgtttctatgagatctcgccggaagagcgcatggacgcggtgaccaaggtgttggcg
cacttccgcccagcgtcttgcgtagcgttctgcttcaccaagcagcaagtgcaggaaacc
gtggatcacctgacggccaagggcatttccgccgtcggcctgcatggcgacctggaacag
cgcgaccgtgaccaggtactggcaatgttcgccaaccgcagtacctcagtgttggtcgct
accgacgtggctgcccgtggcttggacattgattcgctggacatggtgatcaacgttgaa
ctggcccgcgactcggaaatccacatccaccgcgtcggccgtaccggccgtgccggtgag
accggcattgcgatcagcctggtggcgccgtccgaggcgcaccgcgcccaggccatcgag
caactgcagaagtcgccgctgaactgggaccaactggacaacctcaagccgcaaagcggt
ggtccgttgctgccgcagatgagcaccttgtgcatcgctgcaggccgtaaagacaaggtt
cgcccaggcgacatcctcggtgcactgaccggtgaagccggcatcccgggagcccaggtc
ggcaagatcgcgatctttgacttccaggctttcgtggccgtggagcgcgggatcgccaag
caggcgttgcagcgtttgaacgacggcaagatcaaaggccgttcgttgcgcgtgcggatc
ctgtaa
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