Pseudomonas sp. NS1(2017): CI807_04805
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Entry
CI807_04805 CDS
T11105
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CI807_04805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psns03019
]
CI807_04805
Messenger RNA biogenesis [BR:
psns03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CI807_04805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
ASV35528
LinkDB
All DBs
Position
complement(993899..994378)
Genome browser
AA seq
159 aa
AA seq
DB search
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
EREDVQILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLISNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggtttccgtcctaatgtcgggattattcttacgaatgatgccgga
caggtgctatgggctcgccgaatcaaccaagatgcctggcagtttcctcaaggcggaatc
aaccccgacgaaacccctgaagacgccttgtaccgtgagttgaacgaagaagtcggcctt
gagcgcgaagatgtacaaattctggcctgtacccgtggctggttgcgctatcgtttgccg
caacgcctggtgcgtacccacagccaaccgctgtgcatcggccagaagcagaaatggttt
ctcctgcggctgatctccaatgagcagcgggtgcggatggatttgaccggtaaaccggag
ttcgatggttggcgctgggtcagctattggtacccgttgggccaggtggtgacattcaag
cgcgaagtttatcgtcgcgctctcaaagagcttgccccgcgccttttagcgcgcgactga
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